CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.2238s0010
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.2238s0010
T259076_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2238s0010.1.p
MADS box
10
57
MVKDSNSRQVTFSKRRTGVFKKANELATLCAVQIAIIVFSPGGKPFSF
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0560s0040
Salix purpurea
SapurV1A.0560s0040
N
1.000
POPTR_0004s13600
Populus trichocarpa
POPTR_0004s13600
N
0.979
Ciclev10017472m.g
Citrus clementina
Ciclev10017472m.g
I
0.896
Eucgr.D00311
Eucalyptus grandis
Eucgr.D00311
N
0.896
orange1.1g037442m.g
Citrus sinensis
orange1.1g037442m.g
I
0.896
Eucgr.D00313
Eucalyptus grandis
Eucgr.D00313
N
0.896
29693.m002039
Ricinus communis
29693.m002039
I
0.896
Eucgr.D00312
Eucalyptus grandis
Eucgr.D00312
N
0.875
TCM_029518
Theobroma cacao
TCM_029518
I
0.875
Lus10040832.g
Linum usitatissimum
Lus10040832.g
N
0.875
Gorai.010G165500
Gossypium raimondii
Gorai.010G165500
I
0.854
PRUPE_ppa024816mg
Prunus persica
PRUPE_ppa024816mg
I
0.854
cassava10519.m1
Manihot esculenta
cassava10519.m1
I
0.854
Pm030655
Prunus mume
Pm030655
I
0.854
Lus10016563.g
Linum usitatissimum
Lus10016563.g
N
0.812
MDP0000274606
Malus domestica
MDP0000274606
N
0.812
Lus10011787.g
Linum usitatissimum
Lus10011787.g
N
0.792
MDP0000120467
Malus domestica
MDP0000120467
N
0.792
Cla019897
Citrullus lanatus
Cla019897
N
0.792
gene30567-v1.0-hybrid
Fragaria vesca
gene30567-v1.0-hybrid
I
0.771
Cucsa.212320
Cucumis sativus
Cucsa.212320
N
0.771
Carubv10025656m.g
Capsella rubella
Carubv10025656m.g
I
0.750
evm.TU.supercontig_25.93
Carica papaya
evm.TU.supercontig_25.93
I
0.750
gene14058-v1.0-hybrid
Fragaria vesca
gene14058-v1.0-hybrid
I
0.750
Cagra.7352s0007
Capsella grandiflora
Cagra.7352s0007
I
0.750
AGL29
Arabidopsis lyrata
fgenesh2_kg.4__1464__AT2G34440.1
I
0.750
Bostr.23794s0666
Boechera stricta
Bostr.23794s0666
I
0.750
GLYMA18G20830
Glycine max
GLYMA18G20830
I
0.750
MTR_4g131030
Medicago truncatula
MTR_4g131030
I
0.750
MTR_1g054265
Medicago truncatula
MTR_1g054265
I
0.750
Ca_05023
Cicer arietinum
Ca_05023
I
0.750
GLYMA08G03793
Glycine max
GLYMA08G03793
N
0.750
AGL29
Arabidopsis thaliana
AT2G34440
I
0.750
Bra021910
Brassica rapa
Bra021910
I
0.729
Ca_24185
Cicer arietinum
Ca_24185
I
0.729
Bo4g182590
Brassica oleracea
Bo4g182590
I
0.729
Thhalv10017825m.g
Eutrema salsugineum
Thhalv10017825m.g
I
0.729
MTR_8g051580
Medicago truncatula
MTR_8g051580
I
0.729
MTR_8g079502
Medicago truncatula
MTR_8g079502
I
0.729
GLYMA08G38880
Glycine max
GLYMA08G38880
I
0.708
chr4.LjT16L01.50.nd
Lotus japonicus
chr4.LjT16L01.50.nd
I
0.708
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.708
GLYMA05G35820
Glycine max
GLYMA05G35820
I
0.708
GLYMA05G35811
Glycine max
GLYMA05G35811
I
0.708
GLYMA08G03830
Glycine max
GLYMA08G03830
I
0.708
MTR_8g046350
Medicago truncatula
MTR_8g046350
N
0.708
MTR_1g047550
Medicago truncatula
MTR_1g047550
I
0.708