CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.2714s0010
(
Salix purpurea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SapurV1A.2714s0010
T259080_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2714s0010.1.p
MADS box
16
63
RIEKEDDRLVTFSKRRAGIYKKLSELVALTGAEIACLVFSPGGKPFSY
Links
Other
MADS box
family TFs
Other
Salix purpurea
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.1613s0060
Salix purpurea
SapurV1A.1613s0060
N
1.000
SapurV1A.0619s0200
Salix purpurea
SapurV1A.0619s0200
N
1.000
cassava9834.m1
Manihot esculenta
cassava9834.m1
N
0.812
POPTR_0009s05050
Populus trichocarpa
POPTR_0009s05050
N
0.812
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
0.771
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
0.771
POPTR_0004s13590
Populus trichocarpa
POPTR_0004s13590
N
0.771
POPTR_0001s25850
Populus trichocarpa
POPTR_0001s25850
N
0.771
29693.m002041
Ricinus communis
29693.m002041
N
0.771
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
0.750
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.750
Ciclev10006559m.g
Citrus clementina
Ciclev10006559m.g
N
0.750
29693.m002042
Ricinus communis
29693.m002042
N
0.729
PRUPE_ppa024983mg
Prunus persica
PRUPE_ppa024983mg
N
0.729
Pm008734
Prunus mume
Pm008734
N
0.729
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.729
cassava9826.m1
Manihot esculenta
cassava9826.m1
N
0.729
PRUPE_ppa021886mg
Prunus persica
PRUPE_ppa021886mg
N
0.729
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.729
Ciclev10006439m.g
Citrus clementina
Ciclev10006439m.g
N
0.708
Ciclev10007090m.g
Citrus clementina
Ciclev10007090m.g
N
0.708