Thhalv10017754m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10017754m.g T259144_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10017754m MADS box 15 62

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10028255m.g Eutrema salsugineum Thhalv10028255m.g N 0.875
Bo4g165540 Brassica oleracea Bo4g165540 N 0.854
Bra035685 Brassica rapa Bra035685 N 0.830
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.812
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.812
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.792
TCM_006323 Theobroma cacao TCM_006323 N 0.792
MDP0000434703 Malus domestica MDP0000434703 I 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.792
Pm021070 Prunus mume Pm021070 N 0.792
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.792
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
Bra022434 Brassica rapa Bra022434 N 0.792
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.792
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.792
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.792
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.792
Bra011938 Brassica rapa Bra011938 N 0.792
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.792
Bo1g112460 Brassica oleracea Bo1g112460 N 0.792
Bo4g070340 Brassica oleracea Bo4g070340 N 0.787
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.771
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.771
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.771
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.771
MDP0000278770 Malus domestica MDP0000278770 N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.771
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.771
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.771
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.771
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.771
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.771
Bo5g113750 Brassica oleracea Bo5g113750 N 0.771
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.771
AGL62 Arabidopsis thaliana AT5G60440 I 0.771
Bo2g024910 Brassica oleracea Bo2g024910 N 0.771
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.771
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.771
MDP0000233925 Malus domestica MDP0000233925 N 0.771
Pm021071 Prunus mume Pm021071 N 0.771
Bra038225 Brassica rapa Bra038225 N 0.771
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.771
mgf018529m Mimulus guttatus mgf018529m N 0.750
30099.m001671 Ricinus communis 30099.m001671 N 0.750
Pm021018 Prunus mume Pm021018 N 0.750
Ca_26354 Cicer arietinum Ca_26354 N 0.750
29613.m000367 Ricinus communis 29613.m000367 N 0.750
30099.m001672 Ricinus communis 30099.m001672 N 0.750
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.750
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.750
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.750
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.750
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.750
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.750
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.750
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.750
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.750
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.750
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.750
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.750
Ca_07607 Cicer arietinum Ca_07607 N 0.750
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.750
Ca_04661 Cicer arietinum Ca_04661 N 0.750
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.750
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.750
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.750
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.750
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.750
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.750
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.750
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.750
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.750
Ca_04659 Cicer arietinum Ca_04659 N 0.750
AGL23 Arabidopsis thaliana AT1G65360 N 0.750
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.750
Ca_04660 Cicer arietinum Ca_04660 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.750
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.729
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.729
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.729
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.729
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.729
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.729
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.729
Bra020247 Brassica rapa Bra020247 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.729
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Pm016629 Prunus mume Pm016629 N 0.729
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.729
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.729
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.729
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.729
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.729
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.727
POPTR_0016s12650 Populus trichocarpa POPTR_0016s12650 N 0.723
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.723
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
chr2.CM0250.170.nc Lotus japonicus chr2.CM0250.170.nc N 0.708
LjSGA_025167.1 Lotus japonicus LjSGA_025167.1 N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.708
PGSC0003DMG400040127 Solanum tuberosum PGSC0003DMG400040127 N 0.708
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
PGSC0003DMG400041035 Solanum tuberosum PGSC0003DMG400041035 N 0.708
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.708
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
AGL28 Arabidopsis thaliana AT1G01530 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
MTR_0121s0080 Medicago truncatula MTR_0121s0080 N 0.708
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.708
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.708
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.708
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.708
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.708
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.708
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.708
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.708
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.708
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
mgf022147m Mimulus guttatus mgf022147m N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Ca_04662 Cicer arietinum Ca_04662 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.702