Thhalv10019839m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10019839m.g T259168_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019839m MADS box 10 57

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AB06774.1 Alternaria brassicicola AB06774.1 N 0.000
COCC4DRAFT_126305 Bipolaris maydis COCC4DRAFT_126305 N 0.000
COCMIDRAFT_89478 Bipolaris oryzae COCMIDRAFT_89478 N 0.000
COCSADRAFT_35520 Bipolaris sorokiniana COCSADRAFT_35520 N 0.000
COCVIDRAFT_87173 Bipolaris victoriae COCVIDRAFT_87173 N 0.000
COCCADRAFT_479 Bipolaris zeicola COCCADRAFT_479 N 0.000
e_gw1.4.588.1 Cochliobolus heterostrophus C5 e_gw1.4.588.1 N 0.000
HMPREF1541_05913 Cyphellophora europaea HMPREF1541_05913 N 0.000
PTT_18855 Pyrenophora teres PTT_18855 N 0.000
Z518_10160 Rhinocladiella mackenziei Z518_10160 N 0.000
SETTUDRAFT_142926 Setosphaeria turcica SETTUDRAFT_142926 N 0.000
SNOG_00399 Stagonospora nodorum SNOG_00399 N 0.000