Thhalv10022229m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10022229m.g T259176_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL57
M10917_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G04100_01 		0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022229m MADS box 22 68

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.2570s0298 Boechera stricta Bostr.2570s0298 I 0.833
Cagra.4031s0057 Capsella grandiflora Cagra.4031s0057 I 0.750
Carubv10016398m.g Capsella rubella Carubv10016398m.g I 0.750
AGL57 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000303 I 0.750
AGL57 Arabidopsis thaliana AT3G04100 D 0.729
Bo5g148390 Brassica oleracea Bo5g148390 N 0.708
Bra031945 Brassica rapa Bra031945 N 0.708