1735_Multiple (Saccharomyces paradoxus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 1735_Multiple T259301_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		1.000 1.000
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		1.000 1.000
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.917 0.917
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.917 0.917
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
1735_Multiple MADS box 10 57

Links

Other MADS box family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action