chr3.CM0059.60.nd (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 chr3.CM0059.60.nd T259326_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0059.60.nd MADS box 10 57

Links

Other MADS box family TFs
Other Lotus japonicus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_05023 Cicer arietinum Ca_05023 I 0.854
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.854
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.854
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.854
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.833
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.833
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.833
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.812
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.812
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.812
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.812
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.792
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.792
Ca_24185 Cicer arietinum Ca_24185 I 0.792
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.792
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.792
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.792
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.750
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.729
Bra021910 Brassica rapa Bra021910 I 0.708
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.708
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.708
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.708
Bo4g182590 Brassica oleracea Bo4g182590 I 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.708