LjSGA_042497.2 (Lotus japonicus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 LjSGA_042497.2 T259380_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_042497.2 MADS box 11 56

Links

Other MADS box family TFs
Other Lotus japonicus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL007450 Aedes aegypti AAEL007450 I 0.000
AATE006351 Anopheles atroparvus AATE006351 I 0.000
ACOM030734 Anopheles coluzzii ACOM030734 I 0.000
ACUA009853 Anopheles culicifacies ACUA009853 I 0.000
ADAC003639 Anopheles darlingi ADAC003639 I 0.000
AFAF010941 Anopheles farauti AFAF010941 I 0.000
AFUN006321 Anopheles funestus AFUN006321 I 0.000
AMAM023036 Anopheles maculatus AMAM023036 I 0.000
AMEC006880 Anopheles melas AMEC006880 I 0.000
AMEC015679 Anopheles melas AMEC015679 I 0.000
AMEM014670 Anopheles merus AMEM014670 I 0.000
AQUA000694 Anopheles quadriannulatus AQUA000694 I 0.000
ASTEI01737 Anopheles stephensi ASTEI01737 I 0.000
CPIJ010649 Culex quinquefasciatus CPIJ010649 I 0.000
CpipJ_CPIJ010649 Culex pipiens CpipJ_CPIJ010649 I 0.000
GA17731 Drosophila pseudoobscura FBgn0077741 I 0.000
GD22743 Drosophila simulans FBgn0194139 I 0.000
GE14830 Drosophila yakuba FBgn0232422 I 0.000
GF14661 Drosophila ananassae FBgn0091688 I 0.000
GG24424 Drosophila erecta FBgn0116556 I 0.000
GH13191 Drosophila grimshawi FBgn0120668 I 0.000
GI17766 Drosophila mojavensis FBgn0140507 I 0.000
GJ17592 Drosophila virilis FBgn0204762 I 0.000
GK15475 Drosophila willistoni FBgn0217480 I 0.000
GM18135 Drosophila sechellia FBgn0173042 I 0.000
LCUP002076 Lucilia cuprina LCUP002076 I 0.000
LLOJ001734 Lutzomyia longipalpis LLOJ001734 I 0.000
MDOA000040 Musca domestica MDOA000040 I 0.000
MDOA004014 Musca domestica MDOA004014 I 0.000
MDOA008133 Musca domestica MDOA008133 I 0.000
odd Drosophila melanogaster FBgn0002985 D 0.000
ODDA Anopheles gambiae AGAP007972 I 0.000
ODDB Anopheles gambiae AGAP012585 I 0.000