PDK_20s13009472g001 (Phoenix dactylifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PDK_20s13009472g001 T259442_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s13009472g001 MADS box 10 57

Links

Other MADS box family TFs
Other Phoenix dactylifera TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr9G05780_001 Musa acuminata GSMUA_Achr9G05780_001 N 0.938
Sb03g033380 Sorghum bicolor Sb03g033380 N 0.896
GRMZM2G001139 Zea mays GRMZM2G001139 N 0.896
BRADI2G48690 Brachypodium distachyon BRADI2G48690 N 0.896
Si002988m.g Setaria italica Si002988m.g N 0.896
Pavir.Ea02667 Panicum virgatum Pavir.Ea02667 N 0.896
Pavir.Eb02653 Panicum virgatum Pavir.Eb02653 N 0.896
ORGLA01G0242900 Oryza glaberrima ORGLA01G0242900 N 0.875
OPUNC01G29290 Oryza punctata OPUNC01G29290 N 0.875
ONIVA01G33710 Oryza nivara ONIVA01G33710 N 0.875
ORUFI01G32600 Oryza rufipogon ORUFI01G32600 N 0.875
OGLUM01G33550 Oryza glumaepatula OGLUM01G33550 N 0.875
TRAES3BF048900050CFD_g Triticum aestivum TRAES3BF048900050CFD_g N 0.875
Traes_3AL_219064574 Triticum aestivum Traes_3AL_219064574 N 0.875
MADS32 Oryza sativa OS01G0726400 N 0.875
OBART01G29490 Oryza barthii OBART01G29490 N 0.875
BGIOSGA000892 Oryza indica BGIOSGA000892 N 0.875
GRMZM2G079727 Zea mays GRMZM2G079727 N 0.875
F775_28377 Aegilops tauschii F775_28377 N 0.875
LPERR01G25340 Leersia perrieri LPERR01G25340 N 0.875
OB01G38450 Oryza brachyantha OB01G38450 N 0.875
MLOC_80902 Hordeum vulgare MLOC_80902 N 0.875
GLYMA05G28130 Glycine max GLYMA05G28130 I 0.771
GLYMA08G11110 Glycine max GLYMA08G11110 I 0.750
SapurV1A.0658s0010 Salix purpurea SapurV1A.0658s0010 I 0.729
PK10594.1 Cannabis sativa PK10594.1 I 0.729
PK27158.1 Cannabis sativa PK27158.1 I 0.714
PDK_20s1439001g001 Phoenix dactylifera PDK_20s1439001g001 I 0.708
SapurV1A.0173s0350 Salix purpurea SapurV1A.0173s0350 I 0.708
SapurV1A.0833s0010 Salix purpurea SapurV1A.0833s0010 I 0.708
SapurV1A.1717s0010 Salix purpurea SapurV1A.1717s0010 I 0.708
SapurV1A.0173s0340 Salix purpurea SapurV1A.0173s0340 I 0.708
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.708
mgf023192m Mimulus guttatus mgf023192m I 0.708
AMTR_s00001p00218870 Amborella trichopoda AMTR_s00001p00218870 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.708
Lus10037039.g Linum usitatissimum Lus10037039.g I 0.708
Gorai.007G043400 Gossypium raimondii Gorai.007G043400 I 0.708
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.708
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700