AARA006325 (Anopheles arabiensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 AARA006325 T259468_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN

NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.929 0.929
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH

DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.929 0.929
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD

HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.893 0.893
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN

NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.893 0.893
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT

ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.893 0.893
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA

TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.893 0.893
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG

CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.893 0.893
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD

HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.893 0.893
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD

HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.893 0.893
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD

HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.893 0.893
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN

NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.893 0.893
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR

YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.893 0.893
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR

YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.893 0.893
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH

DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.893 0.893
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT

ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.893 0.893
SRF
M10948_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.893 0.893
SRF
M10949_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.893 0.893
SRF
M10950_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.893 0.893
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB

VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.893 0.893
SRF
M10952_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.893 0.893
SRF
M10953_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.893 0.893
SRF
M10954_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.893 0.893
SRF
M10955_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.893 0.893
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN

NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.893 0.893
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG

CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.893 0.893
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG

CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.857 0.857
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN

NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.750 0.750
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN

NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.750 0.750
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW

WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.750 0.750
MCM1
M10991_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.750 0.750
MCM1
M10992_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.750 0.750
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG

CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AARA006325-PA MADS box 4 31

Links

Other MADS box family TFs
Other Anopheles arabiensis TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.929
AAEL010926 Aedes aegypti AAEL010926 I 0.929
AAEL008720 Aedes aegypti AAEL008720 I 0.929
ANCDUO_04431 Ancylostoma duodenale ANCDUO_04431 I 0.893
H311_03229 Anncaliia algerae H311_03229 I 0.714
H311_03668 Anncaliia algerae H311_03668 I 0.714
AALB009948 Anopheles albimanus AALB009948 I 0.929
AATE011966 Anopheles atroparvus AATE011966 I 0.897
ACHR000964 Anopheles christyi ACHR000964 I 0.963
ACOM041693 Anopheles coluzzii ACOM041693 I 0.929
ACUA004576 Anopheles culicifacies ACUA004576 I 0.929
ADAC008363 Anopheles darlingi ADAC008363 I 0.963
ADIR000346 Anopheles dirus ADIR000346 I 0.963
AEPI007010 Anopheles epiroticus AEPI007010 I 0.964
AFAF013563 Anopheles farauti AFAF013563 I 0.929
AFUN006147 Anopheles funestus AFUN006147 I 0.963
AGAP010512 Anopheles gambiae AGAP010512 I 0.929
AMIN001258 Anopheles minimus AMIN001258 I 0.929
AQUA001308 Anopheles quadriannulatus AQUA001308 I 0.929
ASIS013674 Anopheles sinensis ASIS013674 N 0.929
ASIS007770 Anopheles sinensis ASIS007770 I 0.963
ASTEI07120 Anopheles stephensi ASTEI07120 I 0.963
GB47234 Apis mellifera GB47234 I 0.929
Afo_R000461 Aptenodytes forsteri Afo_R000461 I 0.926
ACEP12187 Atta cephalotes ACEP12187 I 0.929
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.929
BGHDH14_bgh04421 Blumeria graminis BGHDH14_bgh04421 I 0.786
BGIBMGA001384 Bombyx mori BGIBMGA001384 I 0.897
Bcin09g06140 Botrytis cinerea Bcin09g06140 I 0.786
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.929
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.929
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I 0.759
Brh_R011000 Buceros rhinoceros Brh_R011000 I 0.962
BXY_0217000 Bursaphelenchus xylophilus BXY_0217000 I 0.857
CJA08385 Caenorhabditis japonica CJA08385 I 0.857
Aan_R005414 Calypte anna Aan_R005414 I 0.926
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.929
CAGL0I10769g Candida glabrata CAGL0I10769g I 0.714
CANTEDRAFT_132918 Candida tenuis CANTEDRAFT_132918 I 0.786
CapteG221100 Capitella teleta CapteG221100 I 0.929
SRF Cavia porcellus ENSCPOG00000022327 I 0.926
Cmyd_10009988 Chelonia mydas Cmyd_10009988 I 0.893
CLEC013390 Cimex lectularius CLEC013390 I 0.929
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.857
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I 0.759
CFIO01_12657 Colletotrichum fioriniae CFIO01_12657 I 0.786
GLRG_02553 Colletotrichum graminicola GLRG_02553 I 0.786
CH063_12904 Colletotrichum higginsianum CH063_12904 I 0.786
Cob_05053 Colletotrichum orbiculare Cob_05053 I 0.786
CSUB01_05290 Colletotrichum sublineola CSUB01_05290 I 0.786
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.929
CpipJ_CPIJ008335 Culex pipiens CpipJ_CPIJ008335 I 0.818
CPIJ008335 Culex quinquefasciatus CPIJ008335 I 0.818
DACRYDRAFT_57073 Dacryopinax sp DACRYDRAFT_57073 I 0.821
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.929
srfB Dictyostelium discoideum DDB_G0282835 I 0.857
GF11392 Drosophila ananassae FBgn0088432 I 0.929
GG22961 Drosophila erecta FBgn0115118 I 0.929
GH20989 Drosophila grimshawi FBgn0128451 I 0.929
bs Drosophila melanogaster FBgn0004101 D 0.929
GI21322 Drosophila mojavensis FBgn0144052 I 0.929
GL20046 Drosophila persimilis FBgn0157643 I 0.929
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.929
GM11854 Drosophila sechellia FBgn0166795 I 0.929
GD11852 Drosophila simulans FBgn0183591 I 0.929
GJ21595 Drosophila virilis FBgn0208714 I 0.929
GK22205 Drosophila willistoni FBgn0224190 I 0.929
GE14398 Drosophila yakuba FBgn0232006 I 0.929
SRF Erinaceus europaeus ENSEEUG00000005614 I 0.885
ENSFALG00000000878 Ficedula albicollis ENSFALG00000000878 I 0.926
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I 0.962
GGTG_11623 Gaeumannomyces graminis GGTG_11623 I 0.786
Gfo_R009695 Geospiza fortis Gfo_R009695 I 0.926
GLOTRDRAFT_42980 Gloeophyllum trabeum GLOTRDRAFT_42980 I 0.821
SRF Gorilla gorilla ENSGGOG00000006293 I 0.962
HPLM_0000743501 Haemonchus placei HPLM_0000743501 I 0.893
HHAL001485-PA Halyomorpha halys HHAL001485-PA I 0.929
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.929
HMEL017830 Heliconius melpomene HMEL017830 I 0.929
HelroG137972 Helobdella robusta HelroG137972 I 0.821
Hba_21368 Heterorhabditis bacteriophora Hba_21368 I 0.893
ISCW019966 Ixodes scapularis ISCW019966 I 0.929
SAKL0B11704g Lachancea kluyveri SAKL0B11704g I 0.714
LotgiG59850 Lottia gigantea LotgiG59850 I 0.929
SRF Loxodonta africana ENSLAFG00000010278 I 0.926
LCUP011663 Lucilia cuprina LCUP011663 I 0.897
LLOJ005985 Lutzomyia longipalpis LLOJ005985 I 0.867
ENSP00000265354 Macaca fascicularis ENSP00000265354 I 0.833
MGG_02773 Magnaporthe oryzae MGG_02773 I 0.786
MAPG_02274 Magnaporthe poae MAPG_02274 I 0.786
MBM_07319 Marssonina brunnea MBM_07319 I 0.786
MESCA001358 Megaselia scalaris MESCA001358 I 0.963
MCINX015635 Melitaea cinxia MCINX015635 I 0.929
MVLG_04297 Microbotryum violaceum MVLG_04297 I 0.786
DI09_81p70 Microsporidia sp DI09_81p70 I 0.821
E5Q_02524 Mixia osmundae E5Q_02524 I 0.821
e_gw1.6.1281.1 Mucor circinelloides e_gw1.6.1281.1 I 0.821
e_gw1.4.1161.1 Mucor circinelloides e_gw1.4.1161.1 I 0.821
gw1.8.565.1 Mucor circinelloides gw1.8.565.1 I 0.821
gw1.5.917.1 Mucor circinelloides gw1.5.917.1 I 0.821
estExt_fgeneshMC_pm.C_40429 Mucor circinelloides estExt_fgeneshMC_pm.C_40429 I 0.821
MDOA002443 Musca domestica MDOA002443 I 0.929
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I 0.806
ENSMLUG00000008828 Myotis lucifugus ENSMLUG00000008828 I 0.926
NV18787 Nasonia vitripennis NV18787 I 0.929
NCAS_0H03140 Naumovozyma castellii NCAS_0H03140 I 0.714
NCER_102270 Nosema ceranae NCER_102270 I 0.714
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I 0.962
OIDMADRAFT_123333 Oidiodendron maius OIDMADRAFT_123333 I 0.786
SNAPOd2T00012736001 Oikopleura dioica SNAPOd2T00012736001 I 0.750
Ogr17973 Ophisaurus gracilis Ogr17973 I 0.806
ENSOARG00000005757 Ovis aries ENSOARG00000005757 I 0.893
PAXRUDRAFT_829045 Paxillus rubicundulus PAXRUDRAFT_829045 I 0.821
PFICI_14124 Pestalotiopsis fici PFICI_14124 I 0.786
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I 0.759
e_gw1.1.687.1 Phycomyces blakesleeanus e_gw1.1.687.1 I 0.821
gw1.3.516.1 Phycomyces blakesleeanus gw1.3.516.1 I 0.821
gw1.27.105.1 Phycomyces blakesleeanus gw1.27.105.1 I 0.821
fgeneshPB_pg.1__662 Phycomyces blakesleeanus fgeneshPB_pg.1__662 I 0.821
PIIN_00796 Piriformospora indica PIIN_00796 I 0.821
PredSwiss_CON2346.1 Pneumocystis carinii PredSwiss_CON2346.1 I 0.786
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.893
scaffold690-EXSNAP2012.12 Pristionchus exspectatus scaffold690-EXSNAP2012.12 I 0.929
scaffold2825-EXSNAP2012.1 Pristionchus exspectatus scaffold2825-EXSNAP2012.1 I 0.750
Ppa-unc-120 Pristionchus pacificus PPA14131 I 0.929
PSEUBRA_SCAF3g03688 Pseudozyma brasiliensis PSEUBRA_SCAF3g03688 I 0.714
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.893
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.821
RO3G_11614 Rhizopus oryzae RO3G_11614 I 0.821
RO3G_15079 Rhizopus oryzae RO3G_15079 I 0.821
RO3G_07165 Rhizopus oryzae RO3G_07165 I 0.793
RO3G_06121 Rhizopus oryzae RO3G_06121 I 0.821
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.821
RHTO_04199 Rhodosporidium toruloides RHTO_04199 I 0.750
O9G_005180 Rozella allomycis O9G_005180 I 0.893
Scas_Contig649.23 Saccharomyces castellii Scas_Contig649.23 I 0.714
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.929
SBOR_8145 Sclerotinia borealis SBOR_8145 I 0.786
SS1G_05588 Sclerotinia sclerotiorum SS1G_05588 I 0.786
M408DRAFT_79374 Serendipita vermifera M408DRAFT_79374 I 0.821
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.929
SINV23954 Solenopsis invicta SINV23954 I 0.963
SRF Sorex araneus ENSSARG00000003401 I 0.885
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.893
sr10299 Sporisorium reilianum sr10299 I 0.750
SLOPH_1335 Spraguea lophii SLOPH_1335 I 0.714
SNOG_07763 Stagonospora nodorum SNOG_07763 I 0.759
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.750
L889_g24087 Steinernema feltiae L889_g24087 I 0.750
L893_g14743 Steinernema glaseri L893_g14743 I 0.750
L898_g9834 Steinernema monticolum L898_g9834 I 0.750
L892_g14520 Steinernema scapterisci L892_g14520 I 0.750
SMAR003014 Strigamia maritima SMAR003014 I 0.929
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.929
SRF Taeniopygia guttata ENSTGUG00000004738 I 0.926
TELCIR_12851 Teladorsagia circumcincta TELCIR_12851 I 0.926
TELCIR_03792 Teladorsagia circumcincta TELCIR_03792 I 0.893
TC004911 Tribolium castaneum TC004911 I 0.929
D917_02561 Trichinella nativa D917_02561 I 0.929
EFV60876 Trichinella spiralis EFV60876 I 0.929
TriadG59812 Trichoplax adhaerens TriadG59812 I 0.750
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.929
D918_07967 Trichuris suis D918_07967 I 0.929
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.929
VDAG_01770 Verticillium dahliae VDAG_01770 I 0.786
SRF Vicugna pacos ENSVPAG00000008912 I 0.962
J056_002827 Wallemia ichthyophaga J056_002827 I 0.750
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I 0.750
L798_08800 Zootermopsis nevadensis L798_08800 I 0.929