A_00791 (Schistosoma haematobium)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 A_00791 T259521_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM

KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.708 0.708
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM

KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
0.708 0.708
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
0.708 0.708
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH

DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.708 0.708
Mef2
M08214_2.00
Drosophila melanogaster
YTAWWWWTAR

YTAWWWWTAR
ChIP-seq
Contrino et al.(2012)
Mf26
0.708 0.708
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG

CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.708 0.708
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM

KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.708 0.708
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH

DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.708 0.708
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH

DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
0.708 0.708
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH

DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.708 0.708
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH

DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
0.708 0.708
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG

CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.708 0.708
MEF2A
M10933_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.708 0.708
MEF2A
M10934_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.708 0.708
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY

RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.708 0.708
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN

NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.708 0.708
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN

NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.708 0.708
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN

NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.708 0.708
MEF2A
M10939_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.708 0.708
MEF2A
M10940_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.708 0.708
MEF2D
M10957_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
0.708 0.708
MEF2A
M10941_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.708 0.708
MEF2A
M10942_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.708 0.708
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH

DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.708 0.708
MEF2A
M10944_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.708 0.708
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
A_00791 MADS box 10 57

Links

Other MADS box family TFs
Other Schistosoma haematobium TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.000
RSKR_0000187900 Rhabditophanes kr3021 RSKR_0000187900 N 0.000
RSKR_0000570400 Rhabditophanes kr3021 RSKR_0000570400 N 0.000