ANCDUO_04431 (Ancylostoma duodenale)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ANCDUO_04431 T259532_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG

CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.962 0.962
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN

NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.962 0.962
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH

DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.962 0.962
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD

HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.923 0.923
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN

NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.923 0.923
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT

ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.923 0.923
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA

TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.923 0.923
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG

CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.923 0.923
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD

HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.923 0.923
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD

HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.923 0.923
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD

HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.923 0.923
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN

NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.923 0.923
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR

YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.923 0.923
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR

YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.923 0.923
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH

DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.923 0.923
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT

ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.923 0.923
SRF
M10948_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.923 0.923
SRF
M10949_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.923 0.923
SRF
M10950_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.923 0.923
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB

VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.923 0.923
SRF
M10952_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.923 0.923
SRF
M10953_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.923 0.923
SRF
M10954_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.923 0.923
SRF
M10955_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.923 0.923
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN

NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.923 0.923
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG

CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.923 0.923
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN

NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.769 0.769
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN

NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.769 0.769
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW

WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.769 0.769
MCM1
M10991_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.769 0.769
MCM1
M10992_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.769 0.769
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG

CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_04431 MADS box 1 26

Links

Other MADS box family TFs
Other Ancylostoma duodenale TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TELCIR_12851 Teladorsagia circumcincta TELCIR_12851 I 0.963
AARA006325 Anopheles arabiensis AARA006325 I 0.893
AALB009948 Anopheles albimanus AALB009948 I 0.714
LCUP011663 Lucilia cuprina LCUP011663 I 0.862
HHAL001485-PA Halyomorpha halys HHAL001485-PA I 0.862
CLEC013390 Cimex lectularius CLEC013390 I 0.893
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I 0.724
Ogr17973 Ophisaurus gracilis Ogr17973 I 0.774
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I 0.774
Gfo_R009695 Geospiza fortis Gfo_R009695 I 0.889
ENSP00000265354 Macaca fascicularis ENSP00000265354 I 0.800
Cmyd_10009988 Chelonia mydas Cmyd_10009988 I 0.828
Brh_R011000 Buceros rhinoceros Brh_R011000 I 0.923
Afo_R000461 Aptenodytes forsteri Afo_R000461 I 0.889
AATE011966 Anopheles atroparvus AATE011966 I 0.862
ACHR000964 Anopheles christyi ACHR000964 I 0.926
ACOM041693 Anopheles coluzzii ACOM041693 I 0.893
TELCIR_03792 Teladorsagia circumcincta TELCIR_03792 I 0.929
HPLM_0000743501 Haemonchus placei HPLM_0000743501 I 1.000
Hba_21368 Heterorhabditis bacteriophora Hba_21368 I 0.929
BXY_0217000 Bursaphelenchus xylophilus BXY_0217000 I 0.793
LLOJ005985 Lutzomyia longipalpis LLOJ005985 I 0.833
ASTEI07120 Anopheles stephensi ASTEI07120 I 0.926
ASIS007770 Anopheles sinensis ASIS007770 I 0.926
AQUA001308 Anopheles quadriannulatus AQUA001308 I 0.893
AMIN001258 Anopheles minimus AMIN001258 I 0.893
AFUN006147 Anopheles funestus AFUN006147 I 0.926
AFAF013563 Anopheles farauti AFAF013563 I 0.893
AEPI007010 Anopheles epiroticus AEPI007010 I 0.962
ADIR000346 Anopheles dirus ADIR000346 I 0.926
Aan_R005414 Calypte anna Aan_R005414 I 0.889
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I 0.769
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I 0.724
SRF Gorilla gorilla ENSGGOG00000006293 I 0.923
ENSFALG00000000878 Ficedula albicollis ENSFALG00000000878 I 0.889
SRF Erinaceus europaeus ENSEEUG00000005614 I 0.846
SRF Cavia porcellus ENSCPOG00000022327 I 0.889
CPIJ008335 Culex quinquefasciatus CPIJ008335 I 0.758
BGIBMGA001384 Bombyx mori BGIBMGA001384 I 0.862
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I 0.724
AGAP010512 Anopheles gambiae AGAP010512 I 0.758
ADAC008363 Anopheles darlingi ADAC008363 I 0.926
AAEL010926 Aedes aegypti AAEL010926 I 0.962
AAEL008720 Aedes aegypti AAEL008720 I 0.962
SNOG_07763 Stagonospora nodorum SNOG_07763 I 0.724
RO3G_07165 Rhizopus oryzae RO3G_07165 I 0.759
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I 0.923
SRF Loxodonta africana ENSLAFG00000010278 I 0.889
ENSMLUG00000008828 Myotis lucifugus ENSMLUG00000008828 I 0.889
SINV23954 Solenopsis invicta SINV23954 I 0.926
O9G_005180 Rozella allomycis O9G_005180 I 0.857
NCER_102270 Nosema ceranae NCER_102270 I 0.808
MESCA001358 Megaselia scalaris MESCA001358 I 0.926
MCINX015635 Melitaea cinxia MCINX015635 I 0.893
J056_002827 Wallemia ichthyophaga J056_002827 I 0.769
HMEL017830 Heliconius melpomene HMEL017830 I 0.962
SRF Vicugna pacos ENSVPAG00000008912 I 0.923
SRF Taeniopygia guttata ENSTGUG00000004738 I 0.889
SRF Sorex araneus ENSSARG00000003401 I 0.846
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.857
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I 0.923
ENSOARG00000005757 Ovis aries ENSOARG00000005757 I 0.857
CpipJ_CPIJ008335 Culex pipiens CpipJ_CPIJ008335 I 0.758