ANCDUO_04431 (Ancylostoma duodenale)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ANCDUO_04431 T259532_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.962 0.962
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.962 0.962
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.962 0.962
srfA
M02283_2.00 		Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK		 PBM
Weirauch et al.(2014)
pTH5539 		0.923 0.923
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.923 0.923
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.923 0.923
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.923 0.923
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.923 0.923
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.923 0.923
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.923 0.923
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.923 0.923
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.923 0.923
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.923 0.923
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.923 0.923
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.923 0.923
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.923 0.923
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.923 0.923
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.923 0.923
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.923 0.923
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.923 0.923
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.923 0.923
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.923 0.923
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.923 0.923
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.923 0.923
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.923 0.923
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.923 0.923
MCM1
M01558_2.00 		Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR		 PBM
Zhu et al.(2009)
Mcm1 		0.769 0.769
MCM1
M08589_2.00 		Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND		 Misc
DeBoer et al.(2011)
YMR043W_831 		0.769 0.769
MCM1
M10990_2.00 		Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW		 Transfac
Matys et al.(2006)
F$MCM1_01 		0.769 0.769
MCM1
M10991_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_02 		0.769 0.769
MCM1
M10992_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MCM1_Q6 		0.769 0.769
MCM1
M08458_2.00 		Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA		 COMPILED
Mathelier et al.(2014)
MA0331.1 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_04431 MADS box 1 26

Links

Other MADS box family TFs
Other Ancylostoma duodenale TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008046 Acyrthosiphon pisum ACYPI008046 N 0.000
AAEL011202 Aedes aegypti AAEL011202 N 0.000
AALB010881 Anopheles albimanus AALB010881 N 0.000
AARA010375 Anopheles arabiensis AARA010375 N 0.000
AATE014395 Anopheles atroparvus AATE014395 N 0.000
ACOM033597 Anopheles coluzzii ACOM033597 N 0.000
ACUA019091 Anopheles culicifacies ACUA019091 N 0.000
ADAC004518 Anopheles darlingi ADAC004518 N 0.000
AEPI010450 Anopheles epiroticus AEPI010450 N 0.000
AFAF006398 Anopheles farauti AFAF006398 N 0.000
AFUN011454 Anopheles funestus AFUN011454 N 0.000
AGAP000682 Anopheles gambiae AGAP000682 N 0.000
AMAM021559 Anopheles maculatus AMAM021559 N 0.000
AMEC004142 Anopheles melas AMEC004142 N 0.000
AMEM008262 Anopheles merus AMEM008262 N 0.000
AMIN005859 Anopheles minimus AMIN005859 N 0.000
AQUA005761 Anopheles quadriannulatus AQUA005761 N 0.000
ASIS018654 Anopheles sinensis ASIS018654 N 0.000
ASTEI01161 Anopheles stephensi ASTEI01161 N 0.000
GB55103 Apis mellifera GB55103 N 0.000
ACEP12320 Atta cephalotes ACEP12320 N 0.000
BGIBMGA012568 Bombyx mori BGIBMGA012568 N 0.000
Cflo_03961--XP_395909.2_APIME Camponotus floridanus Cflo_03961--XP_395909.2_APIME N 0.000
CpipJ_CPIJ009807 Culex pipiens CpipJ_CPIJ009807 N 0.000
CPIJ009807 Culex quinquefasciatus CPIJ009807 N 0.000
Hsal_01592--XP_395909.2_APIME Harpegnathos saltator Hsal_01592--XP_395909.2_APIME N 0.000
HMEL016765 Heliconius melpomene HMEL016765 N 0.000
PPAI009297 Phlebotomus papatasi PPAI009297 N 0.000
RPRC002411 Rhodnius prolixus RPRC002411 N 0.000
TC000954 Tribolium castaneum TC000954 N 0.000
L798_05103 Zootermopsis nevadensis L798_05103 N 0.000