ANCDUO_04431 (Ancylostoma duodenale)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 ANCDUO_04431 T259532_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG

CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.962 0.962
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN

NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.962 0.962
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH

DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.962 0.962
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD

HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.923 0.923
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN

NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.923 0.923
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT

ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.923 0.923
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA

TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.923 0.923
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG

CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.923 0.923
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD

HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.923 0.923
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD

HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.923 0.923
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD

HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.923 0.923
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN

NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.923 0.923
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR

YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.923 0.923
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR

YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.923 0.923
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH

DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.923 0.923
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT

ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.923 0.923
SRF
M10948_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.923 0.923
SRF
M10949_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.923 0.923
SRF
M10950_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.923 0.923
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB

VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.923 0.923
SRF
M10952_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.923 0.923
SRF
M10953_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.923 0.923
SRF
M10954_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.923 0.923
SRF
M10955_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.923 0.923
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN

NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.923 0.923
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG

CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.923 0.923
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN

NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.769 0.769
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN

NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.769 0.769
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW

WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.769 0.769
MCM1
M10991_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.769 0.769
MCM1
M10992_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.769 0.769
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG

CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_04431 MADS box 1 26

Links

Other MADS box family TFs
Other Ancylostoma duodenale TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI008046 Acyrthosiphon pisum ACYPI008046 N 0.000
AAEL011202 Aedes aegypti AAEL011202 N 0.000
AALB010881 Anopheles albimanus AALB010881 N 0.000
AARA010375 Anopheles arabiensis AARA010375 N 0.000
AATE014395 Anopheles atroparvus AATE014395 N 0.000
ACOM033597 Anopheles coluzzii ACOM033597 N 0.000
ACUA019091 Anopheles culicifacies ACUA019091 N 0.000
ADAC004518 Anopheles darlingi ADAC004518 N 0.000
AEPI010450 Anopheles epiroticus AEPI010450 N 0.000
AFAF006398 Anopheles farauti AFAF006398 N 0.000
AFUN011454 Anopheles funestus AFUN011454 N 0.000
AGAP000682 Anopheles gambiae AGAP000682 N 0.000
AMAM021559 Anopheles maculatus AMAM021559 N 0.000
AMEC004142 Anopheles melas AMEC004142 N 0.000
AMEM008262 Anopheles merus AMEM008262 N 0.000
AMIN005859 Anopheles minimus AMIN005859 N 0.000
AQUA005761 Anopheles quadriannulatus AQUA005761 N 0.000
ASIS018654 Anopheles sinensis ASIS018654 N 0.000
ASTEI01161 Anopheles stephensi ASTEI01161 N 0.000
GB55103 Apis mellifera GB55103 N 0.000
ACEP12320 Atta cephalotes ACEP12320 N 0.000
BGIBMGA012568 Bombyx mori BGIBMGA012568 N 0.000
Cflo_03961--XP_395909.2_APIME Camponotus floridanus Cflo_03961--XP_395909.2_APIME N 0.000
CpipJ_CPIJ009807 Culex pipiens CpipJ_CPIJ009807 N 0.000
CPIJ009807 Culex quinquefasciatus CPIJ009807 N 0.000
Hsal_01592--XP_395909.2_APIME Harpegnathos saltator Hsal_01592--XP_395909.2_APIME N 0.000
HMEL016765 Heliconius melpomene HMEL016765 N 0.000
PPAI009297 Phlebotomus papatasi PPAI009297 N 0.000
RPRC002411 Rhodnius prolixus RPRC002411 N 0.000
TC000954 Tribolium castaneum TC000954 N 0.000
L798_05103 Zootermopsis nevadensis L798_05103 N 0.000