CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000012837
(
Latimeria chalumnae
)
MATalpha_HMGbox,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04769 (MATalpha_HMGbox)
PF00505 (HMG_box)
IPR006856
IPR000910
ENSLACG00000012837
T259831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000014587
MATalpha_HMGbox
239
298
HIPSLKMNSGTSSVRTSMQGTLASPAKVNSIDILSSITSSGYLNDHDAVTKAIQEARQMK
ENSLACP00000014587
Sox
387
455
IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK
ENSLACP00000022286
MATalpha_HMGbox
404
463
HIPSLKMNSGTSSVRTSMQGTLASPAKVNSIDILSSITSSGYLNDHDAVTKAIQEARQMK
ENSLACP00000022286
Sox
552
620
IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYK
Links
Other
MATalpha_HMGbox,Sox
family TFs
Other
Latimeria chalumnae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000002789
Pelodiscus sinensis
ENSPSIG00000002789
I
0.845
ENSLOCG00000015347
Lepisosteus oculatus
ENSLOCG00000015347
N
0.809