IDM1 (Arabidopsis thaliana)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 AT3G14980 T259894_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G14980.1 MBD 245 293
AT3G14980.2 MBD 245 293
AT3G14980.3 MBD 245 293
AT3G14980.4 MBD 245 293
AT3G14980.5 MBD 200 248
AT3G14980.6 MBD 245 293

Links

Other MBD family TFs
Other Arabidopsis thaliana TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.3__1623__AT3G14980.1 Arabidopsis lyrata fgenesh2_kg.3__1623__AT3G14980.1 N 0.898