MBD2 (Arabidopsis thaliana)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 AT5G35330 T259900_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G35330.1 MBD 118 194
AT5G35330.2 MBD 118 194
AT5G35330.3 MBD 118 194
AT5G35330.4 MBD 118 194

Links

Other MBD family TFs
Other Arabidopsis thaliana TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.973
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.920
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.863
Bra038936 Brassica rapa Bra038936 N 0.853
Bo8g030620 Brassica oleracea Bo8g030620 N 0.853
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.808
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.789
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.773
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.773
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.764
TCM_039691 Theobroma cacao TCM_039691 N 0.764
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.760
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.750
mgf002635m Mimulus guttatus mgf002635m N 0.747
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.736
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.733
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.733
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.733
Pm008965 Prunus mume Pm008965 N 0.733
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.733
Ca_15553 Cicer arietinum Ca_15553 N 0.722
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.720
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.720
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.720
Ca_15552 Cicer arietinum Ca_15552 N 0.720
29843.m000288 Ricinus communis 29843.m000288 N 0.707
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.707
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.707