Bo4g098290 (Brassica oleracea)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bo4g098290 T259933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g098290.1 MBD 295 367

Links

Other MBD family TFs
Other Brassica oleracea TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra040421 Brassica rapa Bra040421 N 0.973
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.904
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.877
Bra007723 Brassica rapa Bra007723 N 0.877
Bo8g098350 Brassica oleracea Bo8g098350 N 0.877
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.849
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.849
MBD4 Arabidopsis thaliana AT3G63030 N 0.849
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.836
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.784
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.753
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.753
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.753
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.753
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.753
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.743
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.740
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.740
MBD1 Arabidopsis thaliana AT4G22745 N 0.740
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.726
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.726
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.726
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.712
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.712
29703.m001533 Ricinus communis 29703.m001533 N 0.712
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.712
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.703