Bo8g030620 (Brassica oleracea)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bo8g030620 T259938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g030620.1 MBD 124 201

Links

Other MBD family TFs
Other Brassica oleracea TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra038936 Brassica rapa Bra038936 N 1.000
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.867
MBD2 Arabidopsis thaliana AT5G35330 N 0.853
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.842
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.808
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.789
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.767
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.764
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.764
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.764
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.763
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.761
TCM_039691 Theobroma cacao TCM_039691 N 0.750
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.740
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.736
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.736
mgf002635m Mimulus guttatus mgf002635m N 0.736
Cla005887 Citrullus lanatus Cla005887 N 0.722
MLOC_66533 Hordeum vulgare MLOC_66533 N 0.722
Ca_15552 Cicer arietinum Ca_15552 N 0.722
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.722
Pm008965 Prunus mume Pm008965 N 0.722
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N 0.722
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.722
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N 0.722
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.718
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.718
OBART09G15030 Oryza barthii OBART09G15030 N 0.716
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N 0.716
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.708
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.708
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.708
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.708
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.708
29843.m000288 Ricinus communis 29843.m000288 N 0.704