Bra016665 (Brassica rapa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bra016665 T259951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016665.1-P MBD 4 77

Links

Other MBD family TFs
Other Brassica rapa TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
chr4.CM0025.230.nd Lotus japonicus chr4.CM0025.230.nd I 0.000
Solyc08g082110.2 Solanum lycopersicum Solyc08g082110.2 I 0.000
Si028202m.g Setaria italica Si028202m.g I 0.000
Sb08g002520 Sorghum bicolor Sb08g002520 I 0.000
PRUPE_ppa007708mg Prunus persica PRUPE_ppa007708mg I 0.000
ORGLA12G0007700 Oryza glaberrima ORGLA12G0007700 I 0.000
ORGLA11G0202100 Oryza glaberrima ORGLA11G0202100 I 0.000
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.000
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.000
ONIVA11G01190 Oryza nivara ONIVA11G01190 I 0.000
OMERI11G01580 Oryza meridionalis OMERI11G01580 I 0.000
TCM_016426 Theobroma cacao TCM_016426 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.000
Pavir.J12092 Panicum virgatum Pavir.J12092 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.Db02095 Panicum virgatum Pavir.Db02095 I 0.000
Pavir.Da02163 Panicum virgatum Pavir.Da02163 I 0.000
Lus10001902.g Linum usitatissimum Lus10001902.g I 0.000
Gorai.004G134600 Gossypium raimondii Gorai.004G134600 I 0.000
Cucsa.107310 Cucumis sativus Cucsa.107310 I 0.000
Pm018401 Prunus mume Pm018401 I 0.000
Cla011097 Citrullus lanatus Cla011097 I 0.000
OMERI11G01540 Oryza meridionalis OMERI11G01540 I 0.000
OGLUM11G00880 Oryza glumaepatula OGLUM11G00880 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR12G01100 Leersia perrieri LPERR12G01100 I 0.000
GLYMA04G41701 Glycine max GLYMA04G41701 I 0.000
LPERR07G11260 Leersia perrieri LPERR07G11260 I 0.000
LPERR01G30500 Leersia perrieri LPERR01G30500 I 0.000
GLYMA05G36970 Glycine max GLYMA05G36970 I 0.000
GLYMA06G13090 Glycine max GLYMA06G13090 I 0.000
GRMZM2G139815 Zea mays GRMZM2G139815 I 0.000
GLYMA08G02580 Glycine max GLYMA08G02580 I 0.000
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.000
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.000
OB01G44170 Oryza brachyantha OB01G44170 I 0.000
OB11G27340 Oryza brachyantha OB11G27340 I 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
OBART12G00860 Oryza barthii OBART12G00860 I 0.000
OB12G11040 Oryza brachyantha OB12G11040 I 0.000
BGIOSGA036755 Oryza indica BGIOSGA036755 I 0.000
BGIOSGA034611 Oryza indica BGIOSGA034611 I 0.000
OBART05G20330 Oryza barthii OBART05G20330 I 0.000
OBART11G01120 Oryza barthii OBART11G01120 I 0.000
Pavir.J20374 Panicum virgatum Pavir.J20374 N 0.000
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.000
Pavir.Ca00085 Panicum virgatum Pavir.Ca00085 N 0.000
F775_23346 Aegilops tauschii F775_23346 N 0.000
BRADI4G44342 Brachypodium distachyon BRADI4G44342 N 0.000
TRIUR3_24639 Triticum urartu TRIUR3_24639 N 0.000
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.000
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.000
OPUNC11G00990 Oryza punctata OPUNC11G00990 N 0.000
OPUNC12G01000 Oryza punctata OPUNC12G01000 N 0.000
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.000
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.000
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.000
MLOC_68369 Hordeum vulgare MLOC_68369 N 0.000
Si010813m.g Setaria italica Si010813m.g N 0.000
OMERI01G32500 Oryza meridionalis OMERI01G32500 N 0.000
Traes_5BL_175E7FC38 Triticum aestivum Traes_5BL_175E7FC38 N 0.000
Traes_5DL_09F1F8F79 Triticum aestivum Traes_5DL_09F1F8F79 N 0.000