Bra038936 (Brassica rapa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bra038936 T259958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra038936.1-P MBD 124 201

Links

Other MBD family TFs
Other Brassica rapa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g030620 Brassica oleracea Bo8g030620 N 1.000
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.867
MBD2 Arabidopsis thaliana AT5G35330 N 0.853
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.842
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.808
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.789
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.767
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.764
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.764
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.764
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.763
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.761
TCM_039691 Theobroma cacao TCM_039691 N 0.750
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.740
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.736
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.736
mgf002635m Mimulus guttatus mgf002635m N 0.736
Cla005887 Citrullus lanatus Cla005887 N 0.722
MLOC_66533 Hordeum vulgare MLOC_66533 N 0.722
Ca_15552 Cicer arietinum Ca_15552 N 0.722
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.722
Pm008965 Prunus mume Pm008965 N 0.722
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N 0.722
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.722
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N 0.722
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.718
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.718
OBART09G15030 Oryza barthii OBART09G15030 N 0.716
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N 0.716
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.708
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.708
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.708
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.708
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.708
29843.m000288 Ricinus communis 29843.m000288 N 0.704