CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000017952
(
Astyanax mexicanus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSAMXG00000017952
T260051_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.805
0.805
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.792
0.792
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000018500
MBD
4
40
NDPTGKKFRSKPQLARYLGNSMDLSSFDFRTGKMLMS
ENSAMXP00000018500
MBD
40
114
SKLNKSRQRLRYDNNSQTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQKAVDQPRQLFWEKKLSGL
ENSAMXP00000018501
MBD
1
146
MDRKRWECSALPKGWKREEVARKSGLSAGKSDVYYFSPTGKKFRSKPQLARYLGNSMDLSSFDFRTGKMLMSKLNKSRQRLRYDNNSQTKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQKAVDQPRQLFWEKKLSGL
Links
Other
MBD
family TFs
Other
Astyanax mexicanus
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy