mbd3b (Danio rerio)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSDARG00000042029 T260103_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.792 0.792
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.779 0.779
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000048774 MBD 4 48
ENSDARP00000048774 MBD 40 114
ENSDARP00000131120 MBD 12 63
ENSDARP00000131120 MBD 70 137

Links

Other MBD family TFs
Other Danio rerio TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action