mbd3a (Danio rerio)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSDARG00000061774 T260105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.795 0.795
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000082941 MBD 1 72
ENSDARP00000082941 MBD 77 145
ENSDARP00000123868 MBD 4 40
ENSDARP00000123868 MBD 45 113
ENSDARP00000124340 MBD 1 72
ENSDARP00000124340 MBD 77 145

Links

Other MBD family TFs
Other Danio rerio TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MBD3 Canis familiaris ENSCAFG00000019503 N 0.922
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.922
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.911
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.909
MBD3 Homo sapiens ENSG00000071655 N 0.909
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.909
MBD3 Monodelphis domestica ENSMODG00000004125 N 0.896
MBD3 Felis catus ENSFCAG00000000763 I 0.896
ENSOARG00000012359 Ovis aries ENSOARG00000012359 I 0.896
ENSSHAG00000013346 Sarcophilus harrisii ENSSHAG00000013346 N 0.896
Mbd3 Rattus norvegicus ENSRNOG00000028956 N 0.896
MBD3 Equus caballus ENSECAG00000015485 I 0.896
mbd3.S Xenopus laevis XB-GENE-491557 I 0.896
Mbd3 Mus musculus ENSMUSG00000035478 N 0.896
mbd3b Danio rerio ENSDARG00000042029 I 0.896
ENSAPLG00000003384 Anas platyrhynchos ENSAPLG00000003384 N 0.896
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.893
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.885
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.883
Brh_R003386 Buceros rhinoceros Brh_R003386 N 0.883
Afo_R010057 Aptenodytes forsteri Afo_R010057 N 0.883
ENSP00000156825 Macaca fascicularis ENSP00000156825 N 0.883
MBD3 Meleagris gallopavo ENSMGAG00000002493 N 0.883
Tal_R008196 Tyto alba Tal_R008196 N 0.883
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.870
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.847
mbd3 Xenopus tropicalis XB-GENE-491553 I 0.842
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.821
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.805
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.805
MBD2 Sus scrofa ENSSSCG00000004528 I 0.805
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.805
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.805
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.805
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.805
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.805
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.805
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.805
MBD2 Microcebus murinus ENSMICG00000008970 I 0.805
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.805
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.805
ENSAMXG00000006553 Astyanax mexicanus ENSAMXG00000006553 N 0.804
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.804
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.802
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.802
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.802
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.802
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.802
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.802
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.802
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.802
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.802
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.802
MBD2 Homo sapiens ENSG00000134046 D 0.802
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.802
Mbd2 Mus musculus ENSMUSG00000024513 D 0.793
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.793
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.792
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.792
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.792
MBD3 Tursiops truncatus ENSTTRG00000004412 N 0.792
mbd2.S Xenopus laevis XB-GENE-493780 I 0.789
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.786
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.784
Myotis_brandtii_MBD3_10015627 Myotis brandtii Myotis_brandtii_MBD3_10015627 N 0.769
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.768
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.766
mbd2 Danio rerio ENSDARG00000075952 I 0.765
ENSMPUG00000008045 Mustela putorius furo ENSMPUG00000008045 N 0.764
Pvit_09821 Pogona vitticeps Pvit_09821 N 0.759
ENSMEUG00000003078 Macropus eugenii ENSMEUG00000003078 N 0.750
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.741
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.741
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.736
ENSLACG00000016498 Latimeria chalumnae ENSLACG00000016498 N 0.729
Aan_R011698 Calypte anna Aan_R011698 N 0.728
Gfo_R007597 Geospiza fortis Gfo_R007597 N 0.728
MBD3 Dasypus novemcinctus ENSDNOG00000031786 N 0.709
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.707
ENSOANG00000030623 Ornithorhynchus anatinus ENSOANG00000030623 I 0.701
Alligator_sinensis_CCG000430.1 Alligator sinensis Alligator_sinensis_CCG000430.1 N 0.701