mbd2 (Danio rerio)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSDARG00000075952 T260106_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.853 0.853
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000104037 MBD 1 72
ENSDARP00000104037 MBD 77 136
ENSDARP00000136077 MBD 1 72
ENSDARP00000136077 MBD 78 171

Links

Other MBD family TFs
Other Danio rerio TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.941
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.912
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.892
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.892
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.882
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.882
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.863
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.853
MBD2 Sus scrofa ENSSSCG00000004528 I 0.853
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.853
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.853
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.833
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.833
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.824
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.804
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.784
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.784
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.784
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.784
mbd3.S Xenopus laevis XB-GENE-491557 I 0.784
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.784
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.784
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.784
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.784
ENSAMXG00000007765 Astyanax mexicanus ENSAMXG00000007765 N 0.784
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.784
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.784
MBD2 Homo sapiens ENSG00000134046 D 0.784
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.784
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.784
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.775
Mbd2 Mus musculus ENSMUSG00000024513 D 0.766
mbd3a Danio rerio ENSDARG00000061774 I 0.765
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.760
mbd2.S Xenopus laevis XB-GENE-493780 I 0.754
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.750
estExt_fgenesh2_pg.C_2010088 Branchiostoma floridae estExt_fgenesh2_pg.C_2010088 N 0.735
Mbd3 Mus musculus ENSMUSG00000035478 N 0.725
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.724
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.716