MBD3 (Gasterosteus aculeatus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSGACG00000012755 T260173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.827 0.827
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000016848 MBD 4 50
ENSGACP00000016848 MBD 40 112
ENSGACP00000016849 MBD 3 54
ENSGACP00000016849 MBD 56 126

Links

Other MBD family TFs
Other Gasterosteus aculeatus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.947
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.933
mbd3b Danio rerio ENSDARG00000042029 I 0.920
ENSOARG00000012359 Ovis aries ENSOARG00000012359 I 0.907
MBD3 Canis familiaris ENSCAFG00000019503 N 0.907
MBD3 Felis catus ENSFCAG00000000763 I 0.893
ENSP00000156825 Macaca fascicularis ENSP00000156825 N 0.893
MBD3 Homo sapiens ENSG00000071655 N 0.893
mbd3.S Xenopus laevis XB-GENE-491557 I 0.893
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.893
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.893
mbd3a Danio rerio ENSDARG00000061774 I 0.893
MBD3 Meleagris gallopavo ENSMGAG00000002493 N 0.880
Mbd3 Mus musculus ENSMUSG00000035478 N 0.880
Mbd3 Rattus norvegicus ENSRNOG00000028956 N 0.880
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.880
ENSSHAG00000013346 Sarcophilus harrisii ENSSHAG00000013346 N 0.880
MBD3 Monodelphis domestica ENSMODG00000004125 N 0.880
ENSAPLG00000003384 Anas platyrhynchos ENSAPLG00000003384 N 0.880
Tal_R008196 Tyto alba Tal_R008196 N 0.867
Afo_R010057 Aptenodytes forsteri Afo_R010057 N 0.867
Brh_R003386 Buceros rhinoceros Brh_R003386 N 0.867
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.867
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.859
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.833
MBD2 Sus scrofa ENSSSCG00000004528 I 0.827
MBD2 Microcebus murinus ENSMICG00000008970 I 0.827
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.827
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.827
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.827
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.827
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.827
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.827
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.827
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.827
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.827
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.824
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.813
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.813
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.800
MBD3 Equus caballus ENSECAG00000015485 I 0.798
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.791
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.780
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.773
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.773
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.773
Afo_R000663 Aptenodytes forsteri Afo_R000663 I 0.763
ENSMEUG00000016480 Macropus eugenii ENSMEUG00000016480 I 0.761
Myotis_brandtii_MBD3_10015627 Myotis brandtii Myotis_brandtii_MBD3_10015627 N 0.758
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.747
ENSOANG00000030623 Ornithorhynchus anatinus ENSOANG00000030623 I 0.747
ENSMPUG00000008045 Mustela putorius furo ENSMPUG00000008045 N 0.742
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.738
ENSAMXG00000006553 Astyanax mexicanus ENSAMXG00000006553 N 0.733
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.733
Gfo_R007597 Geospiza fortis Gfo_R007597 N 0.728
Aan_R011698 Calypte anna Aan_R011698 N 0.728
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.720
Alligator_sinensis_CCG000430.1 Alligator sinensis Alligator_sinensis_CCG000430.1 N 0.711
Cmyd_10012649 Chelonia mydas Cmyd_10012649 I 0.705