CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MBD3
(
Gasterosteus aculeatus
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSGACG00000012755
T260173_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.827
0.827
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.813
0.813
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000016848
MBD
4
50
NDPSGKKFRSKPQLARYLGNQMDLSSFDFRTGKMLMSKLNKNRQRLR
ENSGACP00000016848
MBD
40
112
SKLNKNRQRLRYDNNNQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQKAVEQPRQLFWEKKLG
ENSGACP00000016849
MBD
3
54
QSVVSHWGKKIEMVLSHPSGKKFRSKPQLARYLGNQMDLSSFDFRTGKMLMS
ENSGACP00000016849
MBD
56
126
LNKNRQRLRYDNNNQNKGKPDLNTSLPVRQTASIFKQPVTKVTNHPSNKVKTDPQKAVEQPRQLFWEKKLG
Links
Other
MBD
family TFs
Other
Gasterosteus aculeatus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy