ENSLACG00000016038 (Latimeria chalumnae)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSLACG00000016038 T260201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.840 0.840
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR

YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.824 0.824
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000018207 MBD 1 67
ENSLACP00000018207 MBD 73 142

Links

Other MBD family TFs
Other Latimeria chalumnae TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.991
ENSTSYG00000013361 Tarsius syrichta ENSTSYG00000013361 I 0.989
ENSP00000256429 Macaca fascicularis ENSP00000256429 I 0.989
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.984
ENSMEUG00000016480 Macropus eugenii ENSMEUG00000016480 I 0.967
Afo_R000663 Aptenodytes forsteri Afo_R000663 I 0.957
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.953
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.946
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.946
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.946
MBD2 Homo sapiens ENSG00000134046 D 0.946
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.946
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.946
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.946
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.946
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.946
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.946
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.946
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.945
MBD2 Sus scrofa ENSSSCG00000004528 I 0.938
ENSAPLG00000010058 Anas platyrhynchos ENSAPLG00000010058 I 0.938
Mbd2 Mus musculus ENSMUSG00000024513 D 0.928
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.928
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.928
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.928
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.928
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.915
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.907
ENSVPAG00000012298 Vicugna pacos ENSVPAG00000012298 N 0.887
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.887
Cmyd_10012649 Chelonia mydas Cmyd_10012649 I 0.874
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.868
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.827
mbd2.S Xenopus laevis XB-GENE-493780 I 0.825
mbd2 Danio rerio ENSDARG00000075952 I 0.824
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.805
mbd3a Danio rerio ENSDARG00000061774 I 0.805
ENSOANG00000030623 Ornithorhynchus anatinus ENSOANG00000030623 I 0.798
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.796
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.795
ENSOARG00000012359 Ovis aries ENSOARG00000012359 I 0.785
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.784
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.779
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.777
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.777
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.776
Mbd3 Mus musculus ENSMUSG00000035478 N 0.775
MBD3 Felis catus ENSFCAG00000000763 I 0.753
MBD2 Myotis lucifugus ENSMLUG00000009980 I 0.750
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.750
MBD2 Microcebus murinus ENSMICG00000008970 I 0.744
ENSAMXG00000007765 Astyanax mexicanus ENSAMXG00000007765 N 0.739
MBD3 Equus caballus ENSECAG00000015485 I 0.738
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.729
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.728
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.720
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.720
ENSTNIG00000003709 Tetraodon nigroviridis ENSTNIG00000003709 I 0.720
mbd3b Danio rerio ENSDARG00000042029 I 0.717
Pvit_09821 Pogona vitticeps Pvit_09821 N 0.714
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.711
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.709
mbd3.S Xenopus laevis XB-GENE-491557 I 0.708
MBD3 Canis familiaris ENSCAFG00000019503 N 0.708
MBD3 Pteropus vampyrus ENSPVAG00000017085 I 0.708
mbd3 Xenopus tropicalis XB-GENE-491553 I 0.708