CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MBD2
(
Sus scrofa
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01429 (MBD)
IPR001739
ENSSSCG00000004528
T260428_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MBD2
M09256_2.00
Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B
0.991
0.991
Mbd2
M09258_2.00
Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB
Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B
0.973
0.973
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004882
MBD
94
164
SGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPS
ENSSSCP00000004882
MBD
173
238
LRNDPLNQNKGKPDLNTTLPIRQTASIFKQPVTKVTNHPSNKVKSDPQRMNEQPRQLFWEKRLQGL
Links
Other
MBD
family TFs
Other
Sus scrofa
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD2
Oryctolagus cuniculus
ENSOCUG00000021080
I
1.000
MBD2
Monodelphis domestica
ENSMODG00000011041
I
1.000
ENSMMUG00000003136
Macaca mulatta
ENSMMUG00000003136
I
1.000
MBD2
Dasypus novemcinctus
ENSDNOG00000033421
I
1.000
MBD2
Homo sapiens
ENSG00000134046
D
1.000
ENSPANG00000021858
Papio anubis
ENSPANG00000021858
I
1.000
ENSSTOG00000011253
Ictidomys tridecemlineatus
ENSSTOG00000011253
I
1.000
ENSAMEG00000017208
Ailuropoda melanoleuca
ENSAMEG00000017208
I
1.000
MBD2
Gorilla gorilla
ENSGGOG00000013402
I
1.000
MBD2
Pan troglodytes
ENSPTRG00000010033
I
1.000
MBD2
Loxodonta africana
ENSLAFG00000014135
I
1.000
MBD2
Otolemur garnettii
ENSOGAG00000008028
I
0.982
Mbd2
Rattus norvegicus
ENSRNOG00000011853
I
0.982
Mbd2
Mus musculus
ENSMUSG00000024513
D
0.982
MBD2
Callithrix jacchus
ENSCJAG00000001862
I
0.973
MBD2
Tupaia belangeri
ENSTBEG00000015292
I
0.973
ENSLACG00000016038
Latimeria chalumnae
ENSLACG00000016038
I
0.938
ENSP00000256429-D1
Bos grunniens
ENSP00000256429-D1
I
0.884
ENSLOCG00000003370
Lepisosteus oculatus
ENSLOCG00000003370
I
0.884
MBD2
Cavia porcellus
ENSCPOG00000006832
I
0.866
ENSECAG00000022368
Equus caballus
ENSECAG00000022368
I
0.866
ENSCSAG00000018106
Chlorocebus sabaeus
ENSCSAG00000018106
I
0.862
ENSXMAG00000003932
Xiphophorus maculatus
ENSXMAG00000003932
I
0.857
ENSONIG00000012635
Oreochromis niloticus
ENSONIG00000012635
I
0.857
mbd2
Danio rerio
ENSDARG00000075952
I
0.853
mbd2.S
Xenopus laevis
XB-GENE-493780
I
0.851
ENSGACG00000018294
Gasterosteus aculeatus
ENSGACG00000018294
I
0.830
ENSTNIG00000003709
Tetraodon nigroviridis
ENSTNIG00000003709
I
0.830
MBD3
Gasterosteus aculeatus
ENSGACG00000012755
I
0.827
Ogr03458
Ophisaurus gracilis
Ogr03458
I
0.822
ENSTRUG00000006522
Takifugu rubripes
ENSTRUG00000006522
I
0.821
MBD3
Tetraodon nigroviridis
ENSTNIG00000010627
N
0.821
ENSACAG00000008739
Anolis carolinensis
ENSACAG00000008739
I
0.814
ENSTSYG00000013361
Tarsius syrichta
ENSTSYG00000013361
I
0.813
mbd3a
Danio rerio
ENSDARG00000061774
I
0.805
ENSAMXG00000017952
Astyanax mexicanus
ENSAMXG00000017952
I
0.805
ENSPFOG00000003939
Poecilia formosa
ENSPFOG00000003939
I
0.802
ENSAMEG00000003491
Ailuropoda melanoleuca
ENSAMEG00000003491
I
0.795
ENSMEUG00000016480
Macropus eugenii
ENSMEUG00000016480
I
0.793
mbd3.S
Xenopus laevis
XB-GENE-491557
I
0.786
Afo_R000663
Aptenodytes forsteri
Afo_R000663
I
0.785
ENSGMOG00000008953
Gadus morhua
ENSGMOG00000008953
I
0.776
ENSAPLG00000010058
Anas platyrhynchos
ENSAPLG00000010058
I
0.771
MBD2
Myotis lucifugus
ENSMLUG00000009980
I
0.768
estExt_fgenesh2_pg.C_2010088
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010088
N
0.750
ENSXMAG00000012716
Xiphophorus maculatus
ENSXMAG00000012716
I
0.750
MBD3
Pteropus vampyrus
ENSPVAG00000017085
I
0.735
mbd3
Xenopus tropicalis
XB-GENE-491553
I
0.733
MBD3
Equus caballus
ENSECAG00000015485
I
0.726
SMAR015035
Strigamia maritima
SMAR015035
N
0.723
ENSPPYG00000009325
Pongo abelii
ENSPPYG00000009325
I
0.709
Cmyd_10012649
Chelonia mydas
Cmyd_10012649
I
0.705