ENSTNIG00000003709 (Tetraodon nigroviridis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 ENSTNIG00000003709 T260454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBD2
M09256_2.00 		Homo sapiens
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_HUMAN.H11MO.0.B 		0.830 0.830
Mbd2
M09258_2.00 		Mus musculus
VSGKCCGGMKR
YMKCCGGMCSB		 Misc
Kulakovskiy et al.(2013)
MBD2_MOUSE.H11MO.0.B 		0.830 0.830
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006308 MBD 1 72
ENSTNIP00000006308 MBD 82 147

Links

Other MBD family TFs
Other Tetraodon nigroviridis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.947
mbd2 Danio rerio ENSDARG00000075952 I 0.882
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.866
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.860
ENSPFOG00000003939 Poecilia formosa ENSPFOG00000003939 I 0.851
Mbd2 Rattus norvegicus ENSRNOG00000011853 I 0.847
MBD2 Loxodonta africana ENSLAFG00000014135 I 0.838
ENSPANG00000021858 Papio anubis ENSPANG00000021858 I 0.838
ENSMMUG00000003136 Macaca mulatta ENSMMUG00000003136 I 0.838
MBD2 Monodelphis domestica ENSMODG00000011041 I 0.838
MBD2 Oryctolagus cuniculus ENSOCUG00000021080 I 0.838
Mbd2 Mus musculus ENSMUSG00000024513 D 0.838
MBD2 Gorilla gorilla ENSGGOG00000013402 I 0.838
ENSAMEG00000017208 Ailuropoda melanoleuca ENSAMEG00000017208 I 0.838
MBD2 Homo sapiens ENSG00000134046 D 0.838
MBD2 Dasypus novemcinctus ENSDNOG00000033421 I 0.838
ENSSTOG00000011253 Ictidomys tridecemlineatus ENSSTOG00000011253 I 0.838
MBD2 Pan troglodytes ENSPTRG00000010033 I 0.838
MBD2 Sus scrofa ENSSSCG00000004528 I 0.830
MBD2 Otolemur garnettii ENSOGAG00000008028 I 0.829
MBD2 Tupaia belangeri ENSTBEG00000015292 I 0.820
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.820
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.802
mbd2.S Xenopus laevis XB-GENE-493780 I 0.789
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.752
mbd3a Danio rerio ENSDARG00000061774 I 0.741
ENSCSAG00000018106 Chlorocebus sabaeus ENSCSAG00000018106 I 0.740
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.733
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.727
mbd3 Xenopus tropicalis XB-GENE-491553 I 0.725
MBD2 Cavia porcellus ENSCPOG00000006832 I 0.724
ENSECAG00000022368 Equus caballus ENSECAG00000022368 I 0.724
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.720
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.720
mbd3.S Xenopus laevis XB-GENE-491557 I 0.717
mbd3b Danio rerio ENSDARG00000042029 I 0.714
Ogr03458 Ophisaurus gracilis Ogr03458 I 0.713
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.706
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.705
ENSACAG00000008739 Anolis carolinensis ENSACAG00000008739 I 0.705