OBART04G05590 (Oryza barthii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 OBART04G05590 T260736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G05590.1 MBD 172 234
OBART04G05590.1 MBD 238 302
OBART04G05590.1 MBD 318 407
OBART04G05590.2 MBD 172 234
OBART04G05590.2 MBD 238 302
OBART04G05590.2 MBD 318 396
OBART04G05590.3 MBD 172 234
OBART04G05590.3 MBD 238 302
OBART04G05590.3 MBD 318 412

Links

Other MBD family TFs
Other Oryza barthii TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI04G06460 Oryza rufipogon ORUFI04G06460 N 1.000
OS04G0266400 Oryza sativa OS04G0266400 N 1.000
OGLUM04G05370 Oryza glumaepatula OGLUM04G05370 N 1.000
OLONG_011482 Oryza longistaminata OLONG_011482 N 0.995
ONIVA04G03920 Oryza nivara ONIVA04G03920 N 0.995
BGIOSGA015463 Oryza indica BGIOSGA015463 N 0.990
OPUNC04G04750 Oryza punctata OPUNC04G04750 N 0.974
OB04G14360 Oryza brachyantha OB04G14360 N 0.901
LPERR04G03760 Leersia perrieri LPERR04G03760 N 0.808
Pavir.Gb02253 Panicum virgatum Pavir.Gb02253 N 0.759
Traes_2AS_FA50A29DB Triticum aestivum Traes_2AS_FA50A29DB N 0.738
F775_06449 Aegilops tauschii F775_06449 N 0.713
Traes_2DS_AB825FECC Triticum aestivum Traes_2DS_AB825FECC N 0.709
TRIUR3_20569 Triticum urartu TRIUR3_20569 N 0.703