OBART08G18610 (Oryza barthii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 OBART08G18610 T260743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART08G18610.1 MBD 128 190
OBART08G18610.2 MBD 128 190
OBART08G18610.3 MBD 34 97
OBART08G18610.3 C2H2 ZF 153 176
OBART08G18610.3 C2H2 ZF 202 224
OBART08G18610.4 MBD 34 97
OBART08G18610.4 C2H2 ZF 153 176
OBART08G18610.4 C2H2 ZF 202 224
OBART08G18610.5 MBD 34 97
OBART08G18610.5 C2H2 ZF 153 176
OBART08G18610.5 C2H2 ZF 202 224

Links

Other MBD family TFs
Other Oryza barthii TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS08G0485700 Oryza sativa OS08G0485700 N 1.000
BGIOSGA028876 Oryza indica BGIOSGA028876 N 1.000
OS08G0485600 Oryza sativa OS08G0485600 N 1.000
OGLUM08G19580 Oryza glumaepatula OGLUM08G19580 N 0.991
ONIVA08G20630 Oryza nivara ONIVA08G20630 N 0.984
OGLUM08G19590 Oryza glumaepatula OGLUM08G19590 N 0.982
BGIOSGA028878 Oryza indica BGIOSGA028878 N 0.982
OLONG_006294 Oryza longistaminata OLONG_006294 N 0.972
OMERI08G14660 Oryza meridionalis OMERI08G14660 N 0.940
OPUNC08G16580 Oryza punctata OPUNC08G16580 N 0.921
LPERR08G15460 Leersia perrieri LPERR08G15460 N 0.857
OB08G25720 Oryza brachyantha OB08G25720 N 0.746