POPTR_0006s06690 (Populus trichocarpa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 POPTR_0006s06690 T260878_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s06690.1 MBD 1 56

Links

Other MBD family TFs
Other Populus trichocarpa TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.000
Carubv10002665m.g Capsella rubella Carubv10002665m.g I 0.000
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I 0.000
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I 0.000
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.000
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.000
mgf018486m Mimulus guttatus mgf018486m I 0.000
mgf012882m Mimulus guttatus mgf012882m I 0.000
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.000
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.000
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.000
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.000
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.000
29917.m002016 Ricinus communis 29917.m002016 I 0.000
29738.m001046 Ricinus communis 29738.m001046 I 0.000
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.000
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I 0.000
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.000
PK25812.1 Cannabis sativa PK25812.1 I 0.000
PK17141.1 Cannabis sativa PK17141.1 I 0.000
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.000
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.000
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.000
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.000
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I 0.000
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.000
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.000
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.000
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.000
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.000
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.000
Pm029010 Prunus mume Pm029010 I 0.000
Pm015625 Prunus mume Pm015625 I 0.000
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.000
MTR_5g053430 Medicago truncatula MTR_5g053430 I 0.000
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.000
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.000
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I 0.000
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.000
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.000
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.000
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.000
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.000
Bra006257 Brassica rapa Bra006257 I 0.000
anac085 Arabidopsis thaliana AT5G14490 I 0.000
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I 0.000
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.000
MTR_7g033320 Medicago truncatula MTR_7g033320 I 0.000
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.000
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.000
TCM_016984 Theobroma cacao TCM_016984 I 0.000
TCM_011869 Theobroma cacao TCM_011869 I 0.000
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.000
Si024889m.g Setaria italica Si024889m.g I 0.000
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.000
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.000
Cla004701 Citrullus lanatus Cla004701 I 0.000
Cla020673 Citrullus lanatus Cla020673 I 0.000
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.000
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.000
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N 0.000
Bra001000 Brassica rapa Bra001000 N 0.000
anac044 Arabidopsis thaliana AT3G01600 N 0.000
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.000
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.000
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.000
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N 0.000
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N 0.000
Carubv10014004m.g Capsella rubella Carubv10014004m.g N 0.000
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N 0.000