POPTR_0014s13300 (Populus trichocarpa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 POPTR_0014s13300 T260883_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s13300.1 MBD 83 156

Links

Other MBD family TFs
Other Populus trichocarpa TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 1.000
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.959
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.905
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.905
29703.m001533 Ricinus communis 29703.m001533 N 0.865
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.865
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.851
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.851
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.851
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.838
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.824
SapurV1A.0135s0370 Salix purpurea SapurV1A.0135s0370 N 0.824
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.811
Ciclev10022348m.g Citrus clementina Ciclev10022348m.g N 0.808
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 0.808
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.797
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.797
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.784
MBD1 Arabidopsis lyrata scaffold_702078.1 N 0.784
MBD1 Arabidopsis thaliana AT4G22745 N 0.770
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.757
MBD4 Arabidopsis lyrata scaffold_503585.1 N 0.757
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.757
MBD4 Arabidopsis thaliana AT3G63030 N 0.757
Bo4g098290 Brassica oleracea Bo4g098290 N 0.753
Bra040421 Brassica rapa Bra040421 N 0.753
Eucgr.H01546 Eucalyptus grandis Eucgr.H01546 N 0.743
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.730
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.730
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.730
Bra007723 Brassica rapa Bra007723 N 0.716
Bo8g098350 Brassica oleracea Bo8g098350 N 0.716
Pm019897 Prunus mume Pm019897 N 0.703
gene27736-v1.0-hybrid Fragaria vesca gene27736-v1.0-hybrid N 0.703