VIT_11s0016g05580 (Vitis vinifera)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 VIT_11s0016g05580 T261194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_11s0016g05580.t01 MBD 7 80

Links

Other MBD family TFs
Other Vitis vinifera TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.806
Cla016961 Citrullus lanatus Cla016961 N 0.795
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.786
MDP0000152128 Malus domestica MDP0000152128 N 0.784
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.784
MDP0000574053 Malus domestica MDP0000574053 N 0.784
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.770
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.770
MDP0000375866 Malus domestica MDP0000375866 N 0.770
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.770
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.767
PK04144.1 Cannabis sativa PK04144.1 N 0.757
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.757
TCM_038107 Theobroma cacao TCM_038107 N 0.757
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.757
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.757
Pm027560 Prunus mume Pm027560 N 0.753
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.753
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.750
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.741
MDP0000462461 Malus domestica MDP0000462461 N 0.741
MDP0000301302 Malus domestica MDP0000301302 N 0.741
Cla012423 Citrullus lanatus Cla012423 N 0.740
Ca_06682 Cicer arietinum Ca_06682 N 0.740
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.735
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.730
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.730
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.730
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.730
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.730
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.730
Pm013666 Prunus mume Pm013666 N 0.729
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.727
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.726
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.726
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.726
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.725
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.722
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.722
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.718
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.718
OS12G0620400 Oryza sativa OS12G0620400 N 0.718
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.718
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.718
OBART12G19140 Oryza barthii OBART12G19140 N 0.718
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.718
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.718
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.718
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.718
MDP0000248422 Malus domestica MDP0000248422 N 0.716
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.716
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.716
OB12G26010 Oryza brachyantha OB12G26010 N 0.714
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.714
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.714
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.712
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.708
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.708
Si035862m.g Setaria italica Si035862m.g N 0.704
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N 0.704
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.704
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.703
Ca_19192 Cicer arietinum Ca_19192 N 0.703
Cla012920 Citrullus lanatus Cla012920 N 0.703
29841.m002855 Ricinus communis 29841.m002855 N 0.703
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.703