CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_15553
(
Cicer arietinum
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Ca_15553
T261236_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_15553
MBD
166
241
KPNIAQPPDGWQRLLRIRSEGSSKFADTYYVAPSGKRLRSMVEVQKFLMDHPQYMTDGVTLSRFSFQIPKPLQENY
Links
Other
MBD
family TFs
Other
Cicer arietinum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_15552
Cicer arietinum
Ca_15552
N
0.958
evm.TU.supercontig_115.32
Carica papaya
evm.TU.supercontig_115.32
N
0.875
chr2.CM0373.530.nc
Lotus japonicus
chr2.CM0373.530.nc
N
0.861
TCM_039691
Theobroma cacao
TCM_039691
N
0.861
POPTR_0006s07730
Populus trichocarpa
POPTR_0006s07730
N
0.847
cassava11725.valid.m1
Manihot esculenta
cassava11725.valid.m1
N
0.847
SapurV1A.0001s2550
Salix purpurea
SapurV1A.0001s2550
N
0.833
GLYMA01G00520
Glycine max
GLYMA01G00520
N
0.833
Eucgr.C00067
Eucalyptus grandis
Eucgr.C00067
N
0.833
MBD02
Vitis vinifera
VIT_11s0065g01010
N
0.833
MTR_6g093020
Medicago truncatula
MTR_6g093020
N
0.833
GLYMA07G15620
Glycine max
GLYMA07G15620
N
0.819
POPTR_0018s14340
Populus trichocarpa
POPTR_0018s14340
N
0.778
mgf002635m
Mimulus guttatus
mgf002635m
N
0.778
Ciclev10008843m.g
Citrus clementina
Ciclev10008843m.g
N
0.764
29843.m000288
Ricinus communis
29843.m000288
N
0.764
Thhalv10003457m.g
Eutrema salsugineum
Thhalv10003457m.g
N
0.750
orange1.1g019505m.g
Citrus sinensis
orange1.1g019505m.g
N
0.750
Cla005887
Citrullus lanatus
Cla005887
N
0.750
Lus10021593.g
Linum usitatissimum
Lus10021593.g
N
0.750
GSMUA_Achr3G05490_001
Musa acuminata
GSMUA_Achr3G05490_001
N
0.736
Lus10017146.g
Linum usitatissimum
Lus10017146.g
N
0.736
PGSC0003DMG400013699
Solanum tuberosum
PGSC0003DMG400013699
N
0.736
MBD02
Arabidopsis lyrata
scaffold_703403.1
N
0.736
Aquca_018_00160
Aquilegia coerulea
Aquca_018_00160
N
0.736
GSMUA_Achr9G14080_001
Musa acuminata
GSMUA_Achr9G14080_001
N
0.736
Solyc05g047450.1
Solanum lycopersicum
Solyc05g047450.1
N
0.736
Bostr.29044s0085
Boechera stricta
Bostr.29044s0085
N
0.736
MBD2
Arabidopsis thaliana
AT5G35330
N
0.722
MTR_3g037440
Medicago truncatula
MTR_3g037440
N
0.722
PRUPE_ppa008652mg
Prunus persica
PRUPE_ppa008652mg
N
0.722
Pm008965
Prunus mume
Pm008965
N
0.722
MTR_3g435470
Medicago truncatula
MTR_3g435470
N
0.708