Pm008965 (Prunus mume)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pm008965 T261300_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm008965 MBD 171 244

Links

Other MBD family TFs
Other Prunus mume TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 1.000
MDP0000222923 Malus domestica MDP0000222923 N 0.903
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.887
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.861
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.847
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.833
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.833
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.819
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.817
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.806
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.806
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.806
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.806
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.795
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.792
TCM_039691 Theobroma cacao TCM_039691 N 0.792
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.792
Cla005887 Citrullus lanatus Cla005887 N 0.778
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.778
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.778
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.778
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.778
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.761
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.750
Ca_15552 Cicer arietinum Ca_15552 N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.747
mgf002635m Mimulus guttatus mgf002635m N 0.736
MBD2 Arabidopsis thaliana AT5G35330 N 0.733
29843.m000288 Ricinus communis 29843.m000288 N 0.732
Ca_15553 Cicer arietinum Ca_15553 N 0.722
Bo8g030620 Brassica oleracea Bo8g030620 N 0.722
Bra038936 Brassica rapa Bra038936 N 0.722
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.722
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.712
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.708
OB09G21610 Oryza brachyantha OB09G21610 N 0.708
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.708
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.708