29843.m000288 (Ricinus communis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 29843.m000288 T261327_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29843.m000288 MBD 172 244

Links

Other MBD family TFs
Other Ricinus communis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.848
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.847
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.819
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.817
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.817
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.817
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.817
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.803
Ca_15552 Cicer arietinum Ca_15552 N 0.803
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.803
mgf002635m Mimulus guttatus mgf002635m N 0.803
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.803
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.803
TCM_039691 Theobroma cacao TCM_039691 N 0.792
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.792
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.778
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.775
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.775
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.775
Ca_15553 Cicer arietinum Ca_15553 N 0.764
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.750
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.746
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.736
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.736
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.736
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.732
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.732
Cla005887 Citrullus lanatus Cla005887 N 0.732
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.732
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.732
Pm008965 Prunus mume Pm008965 N 0.732
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.720
Sb02g028780 Sorghum bicolor Sb02g028780 N 0.718
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N 0.718
MBD2 Arabidopsis thaliana AT5G35330 N 0.707
Bo8g030620 Brassica oleracea Bo8g030620 N 0.704
Pavir.J30425 Panicum virgatum Pavir.J30425 N 0.704
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.704
OB09G21610 Oryza brachyantha OB09G21610 N 0.704
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.704
Si030613m.g Setaria italica Si030613m.g N 0.704
Bra038936 Brassica rapa Bra038936 N 0.704