CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava5958.m1
(
Manihot esculenta
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
cassava5958.m1
T261354_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava5958.m1
MBD
1
56
FVAKKSGTPKKNEIIFTAPTGEEFTGRRQLEQYLKSHPGSPAVSEFDWGTGETPRR
Links
Other
MBD
family TFs
Other
Manihot esculenta
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000574053
Malus domestica
MDP0000574053
N
0.839
PRUPE_ppa008789mg
Prunus persica
PRUPE_ppa008789mg
N
0.839
MDP0000152128
Malus domestica
MDP0000152128
N
0.839
gene31058-v1.0-hybrid
Fragaria vesca
gene31058-v1.0-hybrid
N
0.839
POPTR_0006s06690
Populus trichocarpa
POPTR_0006s06690
N
0.821
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.810
GLYMA04G23980
Glycine max
GLYMA04G23980
N
0.804
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.804
PGSC0003DMG400002913
Solanum tuberosum
PGSC0003DMG400002913
N
0.804
Solyc12g009590.1
Solanum lycopersicum
Solyc12g009590.1
N
0.804
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.786
POPTR_0018s12980
Populus trichocarpa
POPTR_0018s12980
N
0.776
SapurV1A.0034s0480
Salix purpurea
SapurV1A.0034s0480
N
0.768
Aquca_020_00103
Aquilegia coerulea
Aquca_020_00103
N
0.768
VIT_09s0002g06870
Vitis vinifera
VIT_09s0002g06870
N
0.768
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.750
PK04144.1
Cannabis sativa
PK04144.1
N
0.750
Gorai.009G016600
Gossypium raimondii
Gorai.009G016600
N
0.732
MDP0000301302
Malus domestica
MDP0000301302
N
0.732
MDP0000248422
Malus domestica
MDP0000248422
N
0.732
MTR_0339s0010
Medicago truncatula
MTR_0339s0010
N
0.732
MTR_4g114770
Medicago truncatula
MTR_4g114770
N
0.732
Cla012423
Citrullus lanatus
Cla012423
N
0.732
Ciclev10025929m.g
Citrus clementina
Ciclev10025929m.g
N
0.732
cassava6704.valid.m1
Manihot esculenta
cassava6704.valid.m1
N
0.732
Ciclev10010753m.g
Citrus clementina
Ciclev10010753m.g
N
0.724
Cucsa.096390
Cucumis sativus
Cucsa.096390
N
0.714
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.714
Cucsa.295070
Cucumis sativus
Cucsa.295070
N
0.714
Gorai.010G062800
Gossypium raimondii
Gorai.010G062800
N
0.714
Gorai.011G083900
Gossypium raimondii
Gorai.011G083900
N
0.714
Lus10030108.g
Linum usitatissimum
Lus10030108.g
N
0.714