cassava5958.m1 (Manihot esculenta)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 cassava5958.m1 T261354_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava5958.m1 MBD 1 56

Links

Other MBD family TFs
Other Manihot esculenta TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000574053 Malus domestica MDP0000574053 N 0.839
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.839
MDP0000152128 Malus domestica MDP0000152128 N 0.839
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.839
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.821
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.810
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.804
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.804
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.804
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.804
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.786
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.776
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.768
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.768
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.768
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.750
PK04144.1 Cannabis sativa PK04144.1 N 0.750
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.732
MDP0000301302 Malus domestica MDP0000301302 N 0.732
MDP0000248422 Malus domestica MDP0000248422 N 0.732
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.732
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.732
Cla012423 Citrullus lanatus Cla012423 N 0.732
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.732
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.732
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.724
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.714
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.714
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.714
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.714
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.714
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.714