Cucsa.096390 (Cucumis sativus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cucsa.096390 T261357_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.096390.1 MBD 23 96

Links

Other MBD family TFs
Other Cucumis sativus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla012920 Citrullus lanatus Cla012920 N 0.932
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.881
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.811
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.806
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.781
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.770
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.770
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.770
PK24888.1 Cannabis sativa PK24888.1 N 0.770
Bo8g066360 Brassica oleracea Bo8g066360 N 0.770
Bra016665 Brassica rapa Bra016665 N 0.770
TCM_027169 Theobroma cacao TCM_027169 N 0.764
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.757
Ca_19192 Cicer arietinum Ca_19192 N 0.757
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.757
MBD10 Arabidopsis thaliana AT1G15340 N 0.757
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.757
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.753
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.753
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.743
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.743
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.743
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.743
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.743
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.743
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.741
Pm027560 Prunus mume Pm027560 N 0.740
29841.m002855 Ricinus communis 29841.m002855 N 0.730
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.730
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.730
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.730
Pm013666 Prunus mume Pm013666 N 0.729
Ca_06682 Cicer arietinum Ca_06682 N 0.726
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.726
MBD11 Arabidopsis thaliana AT3G15790 N 0.726
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.726
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.716
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.716
PK04144.1 Cannabis sativa PK04144.1 N 0.716
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.716
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.716
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.714
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.703
Bra027207 Brassica rapa Bra027207 N 0.703
MDP0000574053 Malus domestica MDP0000574053 N 0.703
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.703
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.703
TCM_038107 Theobroma cacao TCM_038107 N 0.703
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.703
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.703
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.703
MDP0000152128 Malus domestica MDP0000152128 N 0.703