Cucsa.209330 (Cucumis sativus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cucsa.209330 T261362_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.209330.1 MBD 172 247
Cucsa.209330.2 MBD 172 247
Cucsa.209330.3 MBD 172 230

Links

Other MBD family TFs
Other Cucumis sativus TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.712
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.746
Cla005887 Citrullus lanatus Cla005887 N 0.780
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.729
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.729
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.729
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.847
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.746
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.722
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.712