Cucsa.295070 (Cucumis sativus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cucsa.295070 T261363_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.295070.1 MBD 12 84

Links

Other MBD family TFs
Other Cucumis sativus TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla012423 Citrullus lanatus Cla012423 N 0.890
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.810
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.753
MDP0000301302 Malus domestica MDP0000301302 N 0.741
Pm027560 Prunus mume Pm027560 N 0.740
PK04144.1 Cannabis sativa PK04144.1 N 0.726
MDP0000152128 Malus domestica MDP0000152128 N 0.726
MDP0000574053 Malus domestica MDP0000574053 N 0.726
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.726
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.721
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.714
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.712
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.703
MDP0000375866 Malus domestica MDP0000375866 N 0.703
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.703