CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_549000001
(
Physcomitrella patens
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
fgenesh1_pg.scaffold_549000001
T261387_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_549000001
MBD
510
569
GEGSGKKGGTPKRKDVTFVAPDGEEIKTKRQLDKYLKAHPGTLSAGDFEWGVAETGLERK
Links
Other
MBD
family TFs
Other
Physcomitrella patens
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_510001
Physcomitrella patens
estExt_fgenesh1_pg.C_510001
N
0.826
fgenesh1_pg.scaffold_150000032
Physcomitrella patens
fgenesh1_pg.scaffold_150000032
N
0.755