CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_018_00160
(
Aquilegia coerulea
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Aquca_018_00160
T261423_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_018_00160.1
MBD
186
277
KPNIAQPPPGWDRLLRIRGEGGTRFADVYYTAPSGKRLRSMVEIQKYLDEHPEYVAAGITTKQFSFQIPKPLQEDYVKKRPRVDFSLSRPLE
Aquca_018_00160.2
MBD
186
277
KPNIAQPPPGWDRLLRIRGEGGTRFADVYYTAPSGKRLRSMVEIQKYLDEHPEYVAAGITTKQFSFQIPKPLQEDYVKKRPRVDFSLSRPLE
Links
Other
MBD
family TFs
Other
Aquilegia coerulea
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0018s14340
Populus trichocarpa
POPTR_0018s14340
N
0.861
Ciclev10008843m.g
Citrus clementina
Ciclev10008843m.g
N
0.845
Pm008965
Prunus mume
Pm008965
N
0.833
PRUPE_ppa008652mg
Prunus persica
PRUPE_ppa008652mg
N
0.833
Solyc05g047450.1
Solanum lycopersicum
Solyc05g047450.1
N
0.819
TCM_039691
Theobroma cacao
TCM_039691
N
0.819
MBD02
Vitis vinifera
VIT_11s0065g01010
N
0.819
cassava11725.valid.m1
Manihot esculenta
cassava11725.valid.m1
N
0.819
GSMUA_Achr9G14080_001
Musa acuminata
GSMUA_Achr9G14080_001
N
0.819
SapurV1A.0001s2550
Salix purpurea
SapurV1A.0001s2550
N
0.819
orange1.1g019505m.g
Citrus sinensis
orange1.1g019505m.g
N
0.819
POPTR_0006s07730
Populus trichocarpa
POPTR_0006s07730
N
0.819
PGSC0003DMG400013699
Solanum tuberosum
PGSC0003DMG400013699
N
0.819
evm.TU.supercontig_115.32
Carica papaya
evm.TU.supercontig_115.32
N
0.806
GSMUA_Achr3G05490_001
Musa acuminata
GSMUA_Achr3G05490_001
N
0.806
Gorai.009G001500
Gossypium raimondii
Gorai.009G001500
N
0.804
Eucgr.C00067
Eucalyptus grandis
Eucgr.C00067
N
0.792
Cla005887
Citrullus lanatus
Cla005887
N
0.778
GLYMA07G15620
Glycine max
GLYMA07G15620
N
0.764
MDP0000222923
Malus domestica
MDP0000222923
N
0.764
mgf002635m
Mimulus guttatus
mgf002635m
N
0.764
Ca_15552
Cicer arietinum
Ca_15552
N
0.764
Bostr.29044s0085
Boechera stricta
Bostr.29044s0085
N
0.750
Lus10021593.g
Linum usitatissimum
Lus10021593.g
N
0.750
GLYMA01G00520
Glycine max
GLYMA01G00520
N
0.750
MTR_6g093020
Medicago truncatula
MTR_6g093020
N
0.750
Lus10017146.g
Linum usitatissimum
Lus10017146.g
N
0.750
Ca_15553
Cicer arietinum
Ca_15553
N
0.736
29843.m000288
Ricinus communis
29843.m000288
N
0.736
Thhalv10003457m.g
Eutrema salsugineum
Thhalv10003457m.g
N
0.726
chr2.CM0373.530.nc
Lotus japonicus
chr2.CM0373.530.nc
N
0.722
MBD02
Arabidopsis lyrata
scaffold_703403.1
N
0.720
BRADI1G34320
Brachypodium distachyon
BRADI1G34320
N
0.708
Pavir.J30425
Panicum virgatum
Pavir.J30425
N
0.708
OB09G21610
Oryza brachyantha
OB09G21610
N
0.708
gene12231-v1.0-hybrid
Fragaria vesca
gene12231-v1.0-hybrid
N
0.708
Si030613m.g
Setaria italica
Si030613m.g
N
0.708
LPERR09G11190
Leersia perrieri
LPERR09G11190
N
0.708
MBD2
Arabidopsis thaliana
AT5G35330
N
0.707