Bostr.29044s0085 (Boechera stricta)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Bostr.29044s0085 T261438_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.29044s0085.1.p MBD 148 225

Links

Other MBD family TFs
Other Boechera stricta TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.933
MBD2 Arabidopsis thaliana AT5G35330 N 0.920
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.724
Bo8g030620 Brassica oleracea Bo8g030620 N 0.842
Bra038936 Brassica rapa Bra038936 N 0.842
Cagra.2178s0009 Capsella grandiflora Cagra.2178s0009 N 0.808
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.795
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.778
Ca_15553 Cicer arietinum Ca_15553 N 0.736
Ca_15552 Cicer arietinum Ca_15552 N 0.764
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.817
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.750
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.806
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.932
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.717
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.722
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.778
MDP0000222923 Malus domestica MDP0000222923 N 0.750
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.806
mgf002635m Mimulus guttatus mgf002635m N 0.750
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.736
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.708
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.792
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.736
Pm008965 Prunus mume Pm008965 N 0.806
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.806
29843.m000288 Ricinus communis 29843.m000288 N 0.732
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.763
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.724
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.724
TCM_039691 Theobroma cacao TCM_039691 N 0.778
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.817