Cagra.2178s0009 (Capsella grandiflora)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cagra.2178s0009 T261449_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2178s0009.1.p MBD 146 220

Links

Other MBD family TFs
Other Capsella grandiflora TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10005368m.g Capsella rubella Carubv10005368m.g N 0.959
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.836
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.808
MBD2 Arabidopsis thaliana AT5G35330 N 0.808
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.781
Bra038936 Brassica rapa Bra038936 N 0.767
Bo8g030620 Brassica oleracea Bo8g030620 N 0.767
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.718
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.712
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.712
Pm008965 Prunus mume Pm008965 N 0.712
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.708