Carubv10018084m.g (Capsella rubella)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Carubv10018084m.g T261465_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10018084m MBD 26 139

Links

Other MBD family TFs
Other Capsella rubella TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0448s0007 Capsella grandiflora Cagra.0448s0007 N 1.000
Bostr.18473s0301 Boechera stricta Bostr.18473s0301 N 0.857
MBD5 Arabidopsis thaliana AT3G46580 N 0.844
MBD05 Arabidopsis lyrata fgenesh2_kg.5__1020__AT3G46580.1 N 0.844
Thhalv10002683m.g Eutrema salsugineum Thhalv10002683m.g N 0.753
Bra033814 Brassica rapa Bra033814 N 0.714
Bo1g070790 Brassica oleracea Bo1g070790 N 0.701