Ciclev10022348m.g (Citrus clementina)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Ciclev10022348m.g T261477_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10022348m MBD 84 156

Links

Other MBD family TFs
Other Citrus clementina TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g029175m.g Citrus sinensis orange1.1g029175m.g N 1.000
POPTR_0014s13300 Populus trichocarpa POPTR_0014s13300 N 0.808
SapurV1A.0053s0440 Salix purpurea SapurV1A.0053s0440 N 0.808
cassava29545.valid.m1 Manihot esculenta cassava29545.valid.m1 N 0.797
cassava29544.valid.m1 Manihot esculenta cassava29544.valid.m1 N 0.797
POPTR_0002s22900 Populus trichocarpa POPTR_0002s22900 N 0.770
29703.m001533 Ricinus communis 29703.m001533 N 0.767
evm.TU.supercontig_9.132 Carica papaya evm.TU.supercontig_9.132 N 0.757
Bo4g098290 Brassica oleracea Bo4g098290 N 0.753
SapurV1A.0633s0290 Salix purpurea SapurV1A.0633s0290 N 0.740
Bra040421 Brassica rapa Bra040421 N 0.740
SapurV1A.0633s0300 Salix purpurea SapurV1A.0633s0300 N 0.740
Thhalv10006277m.g Eutrema salsugineum Thhalv10006277m.g N 0.730
Lus10027980.g Linum usitatissimum Lus10027980.g N 0.730
Thhalv10001805m.g Eutrema salsugineum Thhalv10001805m.g N 0.730
Lus10008176.g Linum usitatissimum Lus10008176.g N 0.726
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N 0.726
GLYMA02G16930 Glycine max GLYMA02G16930 N 0.726
GLYMA10G02860 Glycine max GLYMA10G02860 N 0.726
Bostr.7867s0060 Boechera stricta Bostr.7867s0060 N 0.716
Lus10042674.g Linum usitatissimum Lus10042674.g N 0.712
Bra007723 Brassica rapa Bra007723 N 0.703
Bo8g098350 Brassica oleracea Bo8g098350 N 0.703
MBD4 Arabidopsis thaliana AT3G63030 N 0.703
SapurV1A.0135s0370 Salix purpurea SapurV1A.0135s0370 N 0.703
Lus10029631.g Linum usitatissimum Lus10029631.g N 0.703
Carubv10018085m.g Capsella rubella Carubv10018085m.g N 0.703
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N 0.703