Ciclev10025929m.g (Citrus clementina)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Ciclev10025929m.g T261478_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10025929m MBD 41 114

Links

Other MBD family TFs
Other Citrus clementina TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.726
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.743
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.712
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.703
Bo8g066360 Brassica oleracea Bo8g066360 N 0.703
Bra016665 Brassica rapa Bra016665 N 0.703
PK24888.1 Cannabis sativa PK24888.1 N 0.757
PK04144.1 Cannabis sativa PK04144.1 N 0.703
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.929
Ca_19192 Cicer arietinum Ca_19192 N 0.770
Cla012920 Citrullus lanatus Cla012920 N 0.797
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.741
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.730
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 1.000
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.770
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.743
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.767
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.716
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.730
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.757
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.824
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.824
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.712
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.746
MDP0000248422 Malus domestica MDP0000248422 N 0.757
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.919
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.732
Pm013666 Prunus mume Pm013666 N 0.712
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.797
29841.m002855 Ricinus communis 29841.m002855 N 0.824
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.730
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.716
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.730
TCM_038107 Theobroma cacao TCM_038107 N 0.730
TCM_027169 Theobroma cacao TCM_027169 N 0.847
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.784