CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10028859m.g
(
Citrus clementina
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Ciclev10028859m.g
T261479_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10028859m
MBD
65
135
SKSSFKLPRGWSVEERPRTHSPTRPDRIDKYYYEPRTGRQFRSLLSIQKYLTGEEDTVSPKRVKYGNVQNM
Ciclev10028859m
MBD
141
247
ATKSAASFGLPDNWIVQEIPRKNINYAGTIDRYYIEPGTGFRFRSRLAAERYLQEVRKSKSTTNAKEGNLLADLPLRIIVKRQKDAKKIKVTSKEGKPGCHSAHAKN
Ciclev10028866m
MBD
65
135
SKSSFKLPRGWSVEERPRTHSPTRPDRIDKYYYEPRTGRQFRSLLSIQKYLTGEEDTVSPKRVKYGNVQNM
Ciclev10028866m
MBD
141
247
ATKSAASFGLPDNWIVQEIPRKNINYAGTIDRYYIEPGTGFRFRSRLAAERYLQEVRKSKSTTNAKEGNLLADLPLRIIVKRQKDAKKIKVTSKEGKPGCHSAHAKN
Ciclev10029186m
MBD
15
58
FMQYYYEPRTGRQFRSLLSIQKYLTGEEDTVSPKRVKYGNVQNM
Ciclev10029186m
MBD
64
172
ATKSAASFGLPDNWIVQEIPRKNINYAGTIDRYYIEPGTGFRFRSRLAAERYLQEVRKSKSTTNAKEGNLLADLPLRIIVKRQKDAKKIKVTSKEGKPGCHSAHAKNSV
Links
Other
MBD
family TFs
Other
Citrus clementina
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g020861m.g
Citrus sinensis
orange1.1g020861m.g
N
0.934