evm.TU.supercontig_115.32 (Carica papaya)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 evm.TU.supercontig_115.32 T261492_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_115.32 MBD 178 251

Links

Other MBD family TFs
Other Carica papaya TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_039691 Theobroma cacao TCM_039691 N 0.931
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.903
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.903
Ca_15552 Cicer arietinum Ca_15552 N 0.889
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.887
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.875
Ca_15553 Cicer arietinum Ca_15553 N 0.875
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.873
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.870
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.861
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.861
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.847
Cla005887 Citrullus lanatus Cla005887 N 0.847
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.833
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.833
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.819
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.819
mgf002635m Mimulus guttatus mgf002635m N 0.819
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.806
Pm008965 Prunus mume Pm008965 N 0.806
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.806
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.806
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.806
29843.m000288 Ricinus communis 29843.m000288 N 0.803
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.778
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.778
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.778
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.764
Bo8g030620 Brassica oleracea Bo8g030620 N 0.764
Bra038936 Brassica rapa Bra038936 N 0.764
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.753
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.747
MDP0000222923 Malus domestica MDP0000222923 N 0.736
MBD2 Arabidopsis thaliana AT5G35330 N 0.733
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.729
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.722
MTR_3g037440 Medicago truncatula MTR_3g037440 N 0.708
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.708